RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 AKAP14Q86UN6 197 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 CYB561D1Q8N8Q1 229 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 C11orf72Q8NBR9 251 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF680Q8NEM1 530 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 STOML3Q8TAV4 291 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 NDFIP1Q9BT67 221 aa6.35□□□□□ -1.39
GTF3C1-210ENST00000569394 NACAE9PAV3 2078 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 A0A1W2PRE2 83 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 SEC11BP0C7V7 166 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 ZNF415Q09FC8 603 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 NHLRC2Q8NBF2 726 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 SUN5Q8TC36 379 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 ATG101Q9BSB4 218 aa6.34□□□□□ -1.39
GTF3C1-210ENST00000569394 A0A096LPF7 62 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TRAV21A0A0B4J279 112 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 C9JCJ5 164 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 PEX7O00628 323 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 IGLV2-11P01706 119 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TYMSP04818 313 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 NMBP08949 121 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 H2AFB1P0C5Y9 115 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 SFTA3P0C7M3 94 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 P0DMU3 169 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 NKX2-5P52952 324 aaPredicted RBP6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TCL1AP56279 114 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TCTAP57738 103 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 EIF5AP63241 154 aaKnown RBP6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 ZFP69Q49AA0 526 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 Q6AWC8 147 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TCTE3Q8IZS6 198 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 ARL2-SNX15V9GYD0 113 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
GTF3C1-210ENST00000569394 TRGV11A0A075B6L2 103 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 IGHV3-16A0A0C4DH30 117 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 M0R036 132 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 SPINK4O60575 86 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 C1QBP02746 253 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 AKR1C3P42330 323 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 UBE2G1P62253 170 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 CCL20P78556 96 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 DAZ2Q13117 558 aaKnown RBP6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 ODF1Q14990 250 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 SMUG1Q53HV7 270 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 POM121L12Q8N7R1 296 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 SDF2L1Q9HCN8 221 aa6.32□□□□□ -1.4
GTF3C1-210ENST00000569394 IGHV3-73A0A0B4J1V6 119 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 TRBV7-9A0A0J9YWB2 115 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 SCO2A0A1W2PP80 73 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 UMAD1C9J7I0 102 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 ORM1P02763 201 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 PPT1P50897 306 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 Q86TA4 180 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 LINC00612Q8N6U2 182 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 MBD3L1Q8WWY6 194 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 LINC00467Q9BRT7 94 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 GNG13Q9P2W3 67 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 LENEPQ9Y5L5 61 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 KMT2AQ03164 3969 aa6.31□□□□□ -1.4
GTF3C1-210ENST00000569394 TRGV4A0A0C4DH28 118 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 SERTM2A0A1B0GWG4 89 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 GRIFINA4D1Z8 144 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 C9orf62Q8N4C0 152 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 C15orf53Q8NAA6 179 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 ZC2HC1AQ96GY0 325 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 FAM210BQ96KR6 192 aa6.3□□□□□ -1.4
GTF3C1-210ENST00000569394 PAX4O43316 350 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 SH2D1AO60880 128 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 PFN1P07737 140 aaKnown RBP6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 CRIP1P50238 77 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 SSTP61278 116 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 SAPCD1Q5SSQ6 148 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 PRR27Q6MZM9 219 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 ALKAL2Q6UX46 152 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 SLC51BQ86UW2 128 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 ARL6IP6Q8N6S5 226 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 OR4C5Q8NGB2 326 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 HIST1H2BAQ96A08 127 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 VSIG2Q96IQ7 327 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 KCNS1Q96KK3 526 aa6.29□□□□□ -1.4
GTF3C1-210ENST00000569394 IGKV3D-20A0A0C4DH25 116 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 FABP5P3A8MUU1 101 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 H3BVH4 76 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 S100A4P26447 101 aaKnown RBP6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 CCL18P55774 89 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 FHL2Q14192 279 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 EIF5AL1Q6IS14 154 aaKnown RBP6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 DPPA3Q6W0C5 159 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 FMC1Q96HJ9 113 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 SPXQ9BT56 116 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 NKX6-2Q9C056 277 aaPredicted RBP6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 HHLA3Q9XRX5 114 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 LINC00588Q9Y4M8 146 aa6.28□□□□□ -1.4
GTF3C1-210ENST00000569394 LOC100131303A0A0U1RQF7 123 aa6.27□□□□□ -1.41
GTF3C1-210ENST00000569394 RAB19A4D1S5 217 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms