RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 TMEM183AQ8IXX5 376 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 SFT2D1Q8WV19 159 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 SPXQ9BT56 116 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
CLN6-209ENST00000569336 SPINK4O60575 86 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 GCGP01275 180 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 IGLV2-11P01706 119 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 PFN1P07737 140 aaKnown RBP6.91□□□□□ -1.3
CLN6-209ENST00000569336 H2AFB1P0C5Y9 115 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 UBE2G1P62253 170 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 RNF212Q495C1 297 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 CST9LP1Q5W188 147 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 Q86TA4 180 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 MBD3L1Q8WWY6 194 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 FMC1Q96HJ9 113 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 SGK494Q96LW2 274 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 TP53TG3Q9ULZ0 132 aa6.91□□□□□ -1.3
CLN6-209ENST00000569336 H3BNG1 76 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 NUDT3O95989 172 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 FAM3BP58499 235 aaPredicted RBP6.9□□□□□ -1.3
CLN6-209ENST00000569336 OR5I1Q13606 314 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 Q6ZQT7 251 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 TVP23CQ96ET8 276 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 C8orf49Q96NF6 230 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 MANBALQ9NQG1 85 aa6.9□□□□□ -1.3
CLN6-209ENST00000569336 MRPL16Q9NX20 251 aaKnown RBP6.9□□□□□ -1.3
CLN6-209ENST00000569336 RYR1P21817 5038 aa6.9□□□□□ -1.31
CLN6-209ENST00000569336 TRAV26-1A0A087WT03 109 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 PAGE4O60829 102 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 TYMSP04818 313 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
CLN6-209ENST00000569336 AKR1C3P42330 323 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 SLAQ13239 276 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
CLN6-209ENST00000569336 TRAV1-1A0A0B4J248 108 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 TRAV34A0A0B4J273 112 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 IGHV3-16A0A0C4DH30 117 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 TRBV6-1A0A0K0K1D8 114 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 A0A1B0GV50 99 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 M0R2P5 195 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 IFNA1P01562 189 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 HOXA5P20719 270 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 SULT1A2P50226 295 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 CCL18P55774 89 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 RASL10AQ92737 203 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 TXNDC17Q9BRA2 123 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 MDFICQ9P1T7 246 aa6.88□□□□□ -1.31
CLN6-209ENST00000569336 FABP5P3A8MUU1 101 aa6.87□□□□□ -1.31
CLN6-209ENST00000569336 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
CLN6-209ENST00000569336 FAM162BQ5T6X4 162 aa6.87□□□□□ -1.31
CLN6-209ENST00000569336 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
CLN6-209ENST00000569336 LINC00479Q96M42 142 aa6.87□□□□□ -1.31
CLN6-209ENST00000569336 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
CLN6-209ENST00000569336 DNAH10Q8IVF4 4471 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 HECTD4Q9Y4D8 3996 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 TRAV4A0A0B4J268 109 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 TRGV4A0A0C4DH28 118 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 A0A0J9YY99 117 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 GNRH2O43555 120 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 LTAP01374 205 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 COX8CQ7Z4L0 72 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 ICOSQ9Y6W8 199 aa6.86□□□□□ -1.31
CLN6-209ENST00000569336 SCO2A0A1W2PP80 73 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 B4DEV8 164 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 PAX4O43316 350 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 CIDEAO60543 219 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 IGHV3-53P01767 116 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 ORM1P02763 201 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 S100A4P26447 101 aaKnown RBP6.85□□□□□ -1.31
CLN6-209ENST00000569336 TAGLN2P37802 199 aaKnown RBP6.85□□□□□ -1.31
CLN6-209ENST00000569336 ASIPP42127 132 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 ZNF876PQ49A33 203 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
CLN6-209ENST00000569336 ZC2HC1AQ96GY0 325 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
CLN6-209ENST00000569336 C9JCJ5 164 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 PDE6DO43924 150 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 MEF2BQ02080 365 aaPredicted RBP6.84□□□□□ -1.31
CLN6-209ENST00000569336 PTH2Q96A98 100 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 C9orf85Q96MD7 179 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 IL36BQ9NZH7 164 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 HHLA3Q9XRX5 114 aa6.84□□□□□ -1.31
CLN6-209ENST00000569336 SH2D1AO60880 128 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 CRYBA4P53673 196 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 FHL2Q14192 279 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 MRPL23Q16540 153 aaKnown RBP6.83□□□□□ -1.32
CLN6-209ENST00000569336 ZNF674Q2M3X9 581 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 SOHLH1Q5JUK2 328 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 PIK3CD-AS1Q5SR53 167 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 SYT8Q8NBV8 401 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 C11orf52Q96A22 123 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
CLN6-209ENST00000569336 DNAH2Q9P225 4427 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 IGLV2-18A0A075B6J9 118 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 A0A096LPF7 62 aa6.82□□□□□ -1.32
CLN6-209ENST00000569336 IGKV3D-20A0A0C4DH25 116 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms