RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 NAT14Q8WUY8 206 aa0.36□□□□□ -2.35
CYLD-213ENST00000568744 SMPXQ9UHP9 88 aa0.36□□□□□ -2.35
CYLD-213ENST00000568744 PBRM1Q86U86 1689 aa0.36□□□□□ -2.35
CYLD-213ENST00000568744 AFDNP55196 1824 aaKnown RBP0.36□□□□□ -2.35
CYLD-213ENST00000568744 MYH1P12882 1939 aa0.35□□□□□ -2.35
CYLD-213ENST00000568744 UQCRQO14949 82 aa0.35□□□□□ -2.35
CYLD-213ENST00000568744 TFAMQ00059 246 aaKnown RBP0.35□□□□□ -2.35
CYLD-213ENST00000568744 TOMM20LQ6UXN7 152 aa0.35□□□□□ -2.35
CYLD-213ENST00000568744 SLC25A5P05141 298 aaKnown RBP0.34□□□□□ -2.36
CYLD-213ENST00000568744 ASB16-AS1Q495Z4 193 aa0.34□□□□□ -2.36
CYLD-213ENST00000568744 RBBP6Q7Z6E9 1792 aaKnown RBP0.34□□□□□ -2.36
CYLD-213ENST00000568744 CCKP06307 115 aa0.33□□□□□ -2.36
CYLD-213ENST00000568744 POLR2JP52435 117 aaKnown RBP0.33□□□□□ -2.36
CYLD-213ENST00000568744 PSPHP78330 225 aa0.33□□□□□ -2.36
CYLD-213ENST00000568744 SELENOSQ9BQE4 189 aa0.33□□□□□ -2.36
CYLD-213ENST00000568744 PGRMC1O00264 195 aaKnown RBP0.32□□□□□ -2.36
CYLD-213ENST00000568744 SMIM15Q7Z3B0 74 aa0.32□□□□□ -2.36
CYLD-213ENST00000568744 TMEM14BQ9NUH8 114 aa0.32□□□□□ -2.36
CYLD-213ENST00000568744 CDK12Q9NYV4 1490 aaPredicted RBP0.32□□□□□ -2.36
CYLD-213ENST00000568744 BDP1A6H8Y1 2624 aa0.32□□□□□ -2.36
CYLD-213ENST00000568744 TRAV17A0A0B4J275 112 aa0.31□□□□□ -2.36
CYLD-213ENST00000568744 PNMA8CA0A1B0GUJ8 204 aa0.31□□□□□ -2.36
CYLD-213ENST00000568744 TCRAP04437 139 aa0.31□□□□□ -2.36
CYLD-213ENST00000568744 ADCYAP1P18509 176 aa0.31□□□□□ -2.36
CYLD-213ENST00000568744 KLKP1Q107X0 134 aa0.31□□□□□ -2.36
CYLD-213ENST00000568744 ZCCHC6Q5VYS8 1495 aaKnown RBP0.3□□□□□ -2.36
CYLD-213ENST00000568744 MAST4O15021 2626 aa0.3□□□□□ -2.36
CYLD-213ENST00000568744 SDC4P31431 198 aa0.3□□□□□ -2.36
CYLD-213ENST00000568744 OR4S1Q8NGB4 309 aa0.3□□□□□ -2.36
CYLD-213ENST00000568744 SKA2Q8WVK7 121 aaPredicted RBP0.3□□□□□ -2.36
CYLD-213ENST00000568744 ESPL1Q14674 2120 aa0.29□□□□□ -2.36
CYLD-213ENST00000568744 HSD17B12Q53GQ0 312 aa0.29□□□□□ -2.36
CYLD-213ENST00000568744 MED23Q9ULK4 1368 aa0.29□□□□□ -2.36
CYLD-213ENST00000568744 RREB1Q92766 1687 aa0.28□□□□□ -2.36
CYLD-213ENST00000568744 HIST1H1BP16401 226 aaKnown RBP0.28□□□□□ -2.36
CYLD-213ENST00000568744 DDA1Q9BW61 102 aa0.28□□□□□ -2.36
CYLD-213ENST00000568744 CALML5Q9NZT1 146 aa0.28□□□□□ -2.36
CYLD-213ENST00000568744 CPDO75976 1380 aa0.28□□□□□ -2.36
CYLD-213ENST00000568744 TRBV10-1A0A0K0K1A3 114 aa0.27□□□□□ -2.37
CYLD-213ENST00000568744 TSTD3H0UI37 97 aa0.27□□□□□ -2.37
CYLD-213ENST00000568744 J3KT08 172 aa0.27□□□□□ -2.37
CYLD-213ENST00000568744 DPM2O94777 84 aa0.27□□□□□ -2.37
CYLD-213ENST00000568744 OR8I2Q8N0Y5 310 aa0.27□□□□□ -2.37
CYLD-213ENST00000568744 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
CYLD-213ENST00000568744 PAEPP09466 180 aa0.26□□□□□ -2.37
CYLD-213ENST00000568744 METTL1Q9UBP6 276 aaKnown RBP0.26□□□□□ -2.37
CYLD-213ENST00000568744 LRP5O75197 1615 aa0.26□□□□□ -2.37
CYLD-213ENST00000568744 SYNE1Q8NF91 8797 aaKnown RBP0.25□□□□□ -2.37
CYLD-213ENST00000568744 OVOS2A0A0G2JMS6 1433 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 APOC1P02654 83 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 TFF1P04155 84 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 MPC1LP0DKB6 136 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 DSCR8Q96T75 97 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 SPAG17Q6Q759 2223 aa0.25□□□□□ -2.37
CYLD-213ENST00000568744 HELZP42694 1942 aaKnown RBP0.25□□□□□ -2.37
CYLD-213ENST00000568744 DLEC1Q9Y238 1755 aa0.24□□□□□ -2.37
CYLD-213ENST00000568744 MT-ND4LP03901 98 aa0.24□□□□□ -2.37
CYLD-213ENST00000568744 PLGLB1Q02325 96 aa0.24□□□□□ -2.37
CYLD-213ENST00000568744 SLC35B3Q9H1N7 401 aa0.24□□□□□ -2.37
CYLD-213ENST00000568744 NDUFAF1Q9Y375 327 aa0.24□□□□□ -2.37
CYLD-213ENST00000568744 TPRP12270 2363 aaKnown RBP0.24□□□□□ -2.37
CYLD-213ENST00000568744 PTPRGP23470 1445 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 C9JAW5 83 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 TMEM141Q96I45 108 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 PROK2Q9HC23 129 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 COA4Q9NYJ1 87 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 KIDINS220Q9ULH0 1771 aa0.23□□□□□ -2.37
CYLD-213ENST00000568744 ABCA1O95477 2261 aa0.22□□□□□ -2.37
CYLD-213ENST00000568744 BLMP54132 1417 aaPredicted RBP0.22□□□□□ -2.37
CYLD-213ENST00000568744 HSPB11Q9Y547 144 aa0.22□□□□□ -2.37
CYLD-213ENST00000568744 A0A096LNT2 108 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 TEX49A0A1B0GTD5 131 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 AKR1D1P51857 326 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 SLC25A26Q70HW3 274 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 VMO1Q7Z5L0 202 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 BANF2Q9H503 90 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 GINS2Q9Y248 185 aa0.21□□□□□ -2.38
CYLD-213ENST00000568744 TANC1Q9C0D5 1861 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 PTPRZ1P23471 2315 aaPredicted RBP0.2□□□□□ -2.38
CYLD-213ENST00000568744 SMIM24O75264 130 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 OR2H2O95918 312 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 CMPK1P30085 196 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 RPS28P62857 69 aaKnown RBP0.2□□□□□ -2.38
CYLD-213ENST00000568744 Q5XG85 94 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 PPP1R1CQ8WVI7 109 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 PPDPFLQ8WWR9 84 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 VPS25Q9BRG1 176 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 TAS2R8Q9NYW2 309 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 KDM6BO15054 1643 aa0.2□□□□□ -2.38
CYLD-213ENST00000568744 H0YJX3 145 aa0.19□□□□□ -2.38
CYLD-213ENST00000568744 OR8B8Q15620 311 aa0.19□□□□□ -2.38
CYLD-213ENST00000568744 TMEM244Q5VVB8 128 aa0.19□□□□□ -2.38
CYLD-213ENST00000568744 KDM5CP41229 1560 aa0.19□□□□□ -2.38
CYLD-213ENST00000568744 XIRP1Q702N8 1843 aaKnown RBP0.18□□□□□ -2.38
CYLD-213ENST00000568744 WDR97A6NE52 1622 aa0.18□□□□□ -2.38
CYLD-213ENST00000568744 TRAV36DV7A0A075B6V5 113 aa0.18□□□□□ -2.38
CYLD-213ENST00000568744 A0A1B0GW64 132 aa0.18□□□□□ -2.38
CYLD-213ENST00000568744 GNG14A0A1W2PPG7 69 aa0.18□□□□□ -2.38
CYLD-213ENST00000568744 ZNF670-ZNF695F2Z2N8 137 aa0.18□□□□□ -2.38
CYLD-213ENST00000568744 TMEM91Q6ZNR0 172 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms