RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 SNAI2O43623 268 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 OR5AL1P0C617 328 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 GZMBP10144 247 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 FABP4P15090 132 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 CAMPP49913 170 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 RPL11P62913 178 aaKnown RBP12.56□□□□□ -0.4
RAB40C-210ENST00000566290 LYZL1Q6UWQ5 148 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 C18orf32Q8TCD1 76 aa12.56□□□□□ -0.4
RAB40C-210ENST00000566290 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 DUSP14O95147 198 aaKnown RBP12.55□□□□□ -0.4
RAB40C-210ENST00000566290 CD28P10747 220 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 KLHL30-AS1Q8NEE0 82 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 OR10D4PQ8NGN7 298 aa12.55□□□□□ -0.4
RAB40C-210ENST00000566290 TSSC4Q9Y5U2 329 aaPredicted RBP12.55□□□□□ -0.4
RAB40C-210ENST00000566290 IGKV3D-20A0A0C4DH25 116 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 GRIFINA4D1Z8 144 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 SERF1AO75920 110 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 ORM1P02763 201 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 FOXI2Q6ZQN5 318 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 TMEM256Q8N2U0 113 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 TMEM191AQ9H0A3 160 aa12.54□□□□□ -0.4
RAB40C-210ENST00000566290 A0A0J9YX75 114 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 CSN3P07498 182 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 EDN2P20800 178 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 LEPP41159 167 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 SLURP1P55000 103 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 CACNG7P62955 275 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 JOSD1Q15040 202 aaPredicted RBP12.53□□□□□ -0.4
RAB40C-210ENST00000566290 PYY3Q5JQD4 70 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 U3KQK5 164 aa12.53□□□□□ -0.4
RAB40C-210ENST00000566290 PRB2P02812 416 aaPredicted RBP12.52□□□□□ -0.41
RAB40C-210ENST00000566290 S100A12P80511 92 aa12.52□□□□□ -0.41
RAB40C-210ENST00000566290 PDZD11Q5EBL8 140 aa12.52□□□□□ -0.41
RAB40C-210ENST00000566290 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 GPX1P07203 203 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 KIAA1644Q3SXP7 199 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 PRR9Q5T870 116 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 FAM104BQ5XKR9 115 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 C18orf65Q6ZTR6 163 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
RAB40C-210ENST00000566290 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
RAB40C-210ENST00000566290 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 BIRC6Q9NR09 4857 aa12.51□□□□□ -0.41
RAB40C-210ENST00000566290 PPBPP02775 128 aa12.5□□□□□ -0.41
RAB40C-210ENST00000566290 TSPOP30536 169 aa12.5□□□□□ -0.41
RAB40C-210ENST00000566290 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
RAB40C-210ENST00000566290 DLX4Q92988 240 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-210ENST00000566290 RAX2Q96IS3 184 aa12.5□□□□□ -0.41
RAB40C-210ENST00000566290 SPAG8Q99932 426 aaPredicted RBP12.5□□□□□ -0.41
RAB40C-210ENST00000566290 EPPK1P58107 5090 aaKnown RBP12.5□□□□□ -0.41
RAB40C-210ENST00000566290 ZNF324O75467 553 aaPredicted RBP12.49□□□□□ -0.41
RAB40C-210ENST00000566290 RAB4AP20338 218 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 PMCHP20382 165 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 DEFB136Q30KP8 78 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 NSUN5P1Q3KNT7 163 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 TENM3Q9P273 2699 aa12.49□□□□□ -0.41
RAB40C-210ENST00000566290 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 NUPR1O60356 82 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 NXPH4O95158 308 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 DEFB114Q30KQ6 69 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 PSMG4Q5JS54 123 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 KHDC1LQ5JSQ8 128 aa12.48□□□□□ -0.41
RAB40C-210ENST00000566290 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 G3V4G9 280 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 CCL24O00175 119 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 ZNF688P0C7X2 276 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 PRB4P10163 310 aaPredicted RBP12.47□□□□□ -0.41
RAB40C-210ENST00000566290 NTF3P20783 257 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 OR2K2Q8NGT1 345 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 RCHY1Q96PM5 261 aa12.47□□□□□ -0.41
RAB40C-210ENST00000566290 IGKV3-7A0A075B6H7 116 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 C7orf71A4D174 169 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 F6UB75 175 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 ZNF705DP0CH99 300 aaPredicted RBP12.46□□□□□ -0.41
RAB40C-210ENST00000566290 ZNF705BP0CI00 300 aaPredicted RBP12.46□□□□□ -0.41
RAB40C-210ENST00000566290 HLA-DRB4P13762 266 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 ASIPP42127 132 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 AMTNQ6UX39 209 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 TMEM61Q8N0U2 210 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 ORMDL3Q8N138 153 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 DYNLRB2Q8TF09 96 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 TPPP3Q9BW30 176 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 HLA-DRB4X5D2U9 266 aa12.46□□□□□ -0.41
RAB40C-210ENST00000566290 A0A1W2PRX2 142 aa12.45□□□□□ -0.42
RAB40C-210ENST00000566290 TWIST1Q15672 202 aa12.45□□□□□ -0.42
RAB40C-210ENST00000566290 FAM110AQ9BQ89 295 aa12.45□□□□□ -0.42
RAB40C-210ENST00000566290 SAMD10Q9BYL1 202 aa12.45□□□□□ -0.42
RAB40C-210ENST00000566290 NIT2Q9NQR4 276 aa12.45□□□□□ -0.42
RAB40C-210ENST00000566290 HSBP1O75506 76 aa12.44□□□□□ -0.42
RAB40C-210ENST00000566290 CDKN1BP46527 198 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms