RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 KIR3DS1Q14943 382 aa14.53□□□□□ -0.08
CLN6-205ENST00000564846 ZNF493Q6ZR52 646 aa14.53□□□□□ -0.08
CLN6-205ENST00000564846 NAGKQ9UJ70 344 aa14.53□□□□□ -0.08
CLN6-205ENST00000564846 HLA-DRB4X5D2U9 266 aa14.53□□□□□ -0.08
CLN6-205ENST00000564846 BAHCC1Q9P281 2608 aa14.52□□□□□ -0.08
CLN6-205ENST00000564846 IGKV3-20P01619 116 aa14.52□□□□□ -0.08
CLN6-205ENST00000564846 SRIP30626 198 aa14.52□□□□□ -0.08
CLN6-205ENST00000564846 AKR1D1P51857 326 aa14.52□□□□□ -0.08
CLN6-205ENST00000564846 OR2K2Q8NGT1 345 aa14.52□□□□□ -0.08
CLN6-205ENST00000564846 C7orf71A4D174 169 aa14.52□□□□□ -0.09
CLN6-205ENST00000564846 A8MTW9 85 aa14.52□□□□□ -0.09
CLN6-205ENST00000564846 PF4P02776 101 aa14.52□□□□□ -0.09
CLN6-205ENST00000564846 S100A2P29034 98 aa14.52□□□□□ -0.09
CLN6-205ENST00000564846 OR10J3Q5JRS4 329 aa14.52□□□□□ -0.09
CLN6-205ENST00000564846 KNCNA6PVL3 124 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 H3BMM0 161 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 IGLV1-51P01701 117 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 OR5AL1P0C617 328 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 TWIST1Q15672 202 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 ANXA2RQ3ZCQ2 193 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 AMTNQ6UX39 209 aa14.51□□□□□ -0.09
CLN6-205ENST00000564846 SNAI2O43623 268 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 NTF3P20783 257 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 PDZD11Q5EBL8 140 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 LOC102724200A0A096LPH7 203 aaPredicted RBP14.5□□□□□ -0.09
CLN6-205ENST00000564846 MUC21A0A0G2JKD1 596 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 MUC21A0A140T8X8 626 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 IFITM10A6NMD0 228 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 SSTP61278 116 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 MUC21Q5SSG8 566 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 KCNS1Q96KK3 526 aa14.5□□□□□ -0.09
CLN6-205ENST00000564846 ALKBH7Q9BT30 221 aaPredicted RBP14.5□□□□□ -0.09
CLN6-205ENST00000564846 M0R2Z0 102 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 ZNF324O75467 553 aaPredicted RBP14.49□□□□□ -0.09
CLN6-205ENST00000564846 ASIPP42127 132 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 CMC4P56277 68 aaPredicted RBP14.49□□□□□ -0.09
CLN6-205ENST00000564846 SPINK13Q1W4C9 94 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 DNLZQ5SXM8 178 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 FAM159AQ6UWV7 190 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 BAGE3Q86Y29 109 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 LINC00482Q8N8I6 264 aa14.49□□□□□ -0.09
CLN6-205ENST00000564846 TRAV12-3A0A0B4J271 114 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 MED14OSP0DP75 135 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 CACNG7P62955 275 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 ODF3L2Q3SX64 289 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 CITED1Q99966 193 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 TP53TG3Q9ULZ0 132 aa14.48□□□□□ -0.09
CLN6-205ENST00000564846 S100A4P26447 101 aaKnown RBP14.47□□□□□ -0.09
CLN6-205ENST00000564846 TMEM256Q8N2U0 113 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 TMEM191AQ9H0A3 160 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 IGHV4-4A0A075B6R2 117 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 TRAV12-2A0A075B6T6 113 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 H3BVH4 76 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 ZNF124Q15973 351 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 TDRG1Q3Y452 100 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 CLUHP3Q96NS8 147 aa14.47□□□□□ -0.09
CLN6-205ENST00000564846 CYSRT1A8MQ03 144 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 OR11H12B2RN74 326 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 PRR31Q5SQ13 230 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 FAM104BQ5XKR9 115 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 OR10AG1Q8NH19 301 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 C18orf32Q8TCD1 76 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 HIST1H2BLQ99880 126 aa14.46□□□□□ -0.09
CLN6-205ENST00000564846 WNK1Q9H4A3 2382 aa14.46□□□□□ -0.1
CLN6-205ENST00000564846 ESDP10768 282 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 SPANXN1Q5VSR9 72 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 MSRB1Q9NZV6 116 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 GNRH2O43555 120 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 FABP4P15090 132 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 FAM110AQ9BQ89 295 aa14.45□□□□□ -0.1
CLN6-205ENST00000564846 SERF1AO75920 110 aa14.44□□□□□ -0.1
CLN6-205ENST00000564846 DMRTA1Q5VZB9 504 aa14.44□□□□□ -0.1
CLN6-205ENST00000564846 TMEM18Q96B42 140 aa14.44□□□□□ -0.1
CLN6-205ENST00000564846 SCRT2Q9NQ03 307 aa14.44□□□□□ -0.1
CLN6-205ENST00000564846 SORL1Q92673 2214 aa14.43□□□□□ -0.1
CLN6-205ENST00000564846 RBMY1BA6NDE4 496 aaKnown RBP14.43□□□□□ -0.1
CLN6-205ENST00000564846 RBMY1EA6NEQ0 496 aaKnown RBP14.43□□□□□ -0.1
CLN6-205ENST00000564846 NUPR1O60356 82 aa14.43□□□□□ -0.1
CLN6-205ENST00000564846 RBMY1DP0C7P1 496 aaKnown RBP14.43□□□□□ -0.1
CLN6-205ENST00000564846 LINC00310P59036 64 aa14.43□□□□□ -0.1
CLN6-205ENST00000564846 SMIM15Q7Z3B0 74 aa14.43□□□□□ -0.1
CLN6-205ENST00000564846 AMN1Q8IY45 258 aa14.43□□□□□ -0.1
CLN6-205ENST00000564846 AMBPP02760 352 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 RNASE3P12724 160 aaKnown RBP14.42□□□□□ -0.1
CLN6-205ENST00000564846 BEAN1Q3B7T3 259 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 PHLDA3Q9Y5J5 127 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 TIMM8BQ9Y5J9 83 aaPredicted RBP14.42□□□□□ -0.1
CLN6-205ENST00000564846 IGHV1OR15-1A0A075B7D0 117 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 CRXO43186 299 aaPredicted RBP14.42□□□□□ -0.1
CLN6-205ENST00000564846 CD7P09564 240 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 STHQ8IWL8 128 aa14.42□□□□□ -0.1
CLN6-205ENST00000564846 PACRGQ96M98 296 aaPredicted RBP14.42□□□□□ -0.1
CLN6-205ENST00000564846 INSL3P51460 131 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 FXYD7P58549 80 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 IQCJQ1A5X6 159 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 OR10D4PQ8NGN7 298 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 RCHY1Q96PM5 261 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 U3KQK5 164 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 AGRNO00468 2067 aa14.41□□□□□ -0.1
CLN6-205ENST00000564846 MRPL51Q4U2R6 128 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms