RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 UFC1Q9Y3C8 167 aa2.59□□□□□ -1.99
CDH1-207ENST00000564745 SOX21Q9Y651 276 aaPredicted RBP2.59□□□□□ -1.99
CDH1-207ENST00000564745 PTPRDP23468 1912 aa2.59□□□□□ -1.99
CDH1-207ENST00000564745 CASP8AP2Q9UKL3 1982 aa2.59□□□□□ -2
CDH1-207ENST00000564745 HELZP42694 1942 aaKnown RBP2.58□□□□□ -2
CDH1-207ENST00000564745 TICRRQ7Z2Z1 1910 aa2.58□□□□□ -2
CDH1-207ENST00000564745 TRIOBPQ9H2D6 2365 aa2.58□□□□□ -2
CDH1-207ENST00000564745 DOCK6Q96HP0 2047 aa2.58□□□□□ -2
CDH1-207ENST00000564745 IGKV1D-43A0A0B4J1Z2 117 aa2.58□□□□□ -2
CDH1-207ENST00000564745 IGHV1-24A0A0C4DH33 117 aa2.58□□□□□ -2
CDH1-207ENST00000564745 A0A1B0GXF2 115 aa2.58□□□□□ -2
CDH1-207ENST00000564745 C16orf90A8MZG2 172 aa2.58□□□□□ -2
CDH1-207ENST00000564745 H0YGG7 62 aa2.58□□□□□ -2
CDH1-207ENST00000564745 NDUFS5O43920 106 aa2.58□□□□□ -2
CDH1-207ENST00000564745 IGKV1-5P01602 117 aa2.58□□□□□ -2
CDH1-207ENST00000564745 CLPSP04118 112 aa2.58□□□□□ -2
CDH1-207ENST00000564745 GCHFRP30047 84 aa2.58□□□□□ -2
CDH1-207ENST00000564745 RBM11P57052 281 aaKnown RBP2.58□□□□□ -2
CDH1-207ENST00000564745 TAS2R45P59539 299 aa2.58□□□□□ -2
CDH1-207ENST00000564745 WFDC2Q14508 124 aa2.58□□□□□ -2
CDH1-207ENST00000564745 RTL8BQ17RB0 113 aa2.58□□□□□ -2
CDH1-207ENST00000564745 CENPWQ5EE01 88 aa2.58□□□□□ -2
CDH1-207ENST00000564745 IBA57Q5T440 356 aaKnown RBP2.58□□□□□ -2
CDH1-207ENST00000564745 KPRPQ5T749 579 aaPredicted RBP2.58□□□□□ -2
CDH1-207ENST00000564745 TMEM215Q68D42 235 aa2.58□□□□□ -2
CDH1-207ENST00000564745 ORMDL3Q8N138 153 aa2.58□□□□□ -2
CDH1-207ENST00000564745 HINT2Q9BX68 163 aa2.58□□□□□ -2
CDH1-207ENST00000564745 TMEM126AQ9H061 195 aa2.58□□□□□ -2
CDH1-207ENST00000564745 TMEM167BQ9NRX6 74 aa2.58□□□□□ -2
CDH1-207ENST00000564745 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.58□□□□□ -2
CDH1-207ENST00000564745 IDI2-AS1Q9NZ38 188 aa2.58□□□□□ -2
CDH1-207ENST00000564745 COL4A2P08572 1712 aa2.58□□□□□ -2
CDH1-207ENST00000564745 NUP210Q8TEM1 1887 aaPredicted RBP2.58□□□□□ -2
CDH1-207ENST00000564745 PLXNB3Q9ULL4 1909 aa2.58□□□□□ -2
CDH1-207ENST00000564745 SPTBN5Q9NRC6 3674 aaKnown RBP2.57□□□□□ -2
CDH1-207ENST00000564745 PLXNA2O75051 1894 aa2.57□□□□□ -2
CDH1-207ENST00000564745 IGHV3OR16-8A0A075B7F1 116 aa2.57□□□□□ -2
CDH1-207ENST00000564745 A0A087WX48 190 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TEX50A0A1B0GTY4 177 aa2.57□□□□□ -2
CDH1-207ENST00000564745 A0A1W2PRE2 83 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TMEM213A2RRL7 107 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TMEM262E9PQX1 116 aa2.57□□□□□ -2
CDH1-207ENST00000564745 H3BMG7 143 aa2.57□□□□□ -2
CDH1-207ENST00000564745 SLC31A1O15431 190 aa2.57□□□□□ -2
CDH1-207ENST00000564745 SCTP09683 121 aa2.57□□□□□ -2
CDH1-207ENST00000564745 ARL14EPLP0DKL9 152 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TCTAP57738 103 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TFF3Q07654 80 aa2.57□□□□□ -2
CDH1-207ENST00000564745 GUSBP1Q15486 140 aa2.57□□□□□ -2
CDH1-207ENST00000564745 LGALS9BQ3B8N2 356 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TTC32Q5I0X7 151 aa2.57□□□□□ -2
CDH1-207ENST00000564745 GDF5OSQ5U4N7 250 aa2.57□□□□□ -2
CDH1-207ENST00000564745 Q6AWC8 147 aa2.57□□□□□ -2
CDH1-207ENST00000564745 LGALS9CQ6DKI2 356 aa2.57□□□□□ -2
CDH1-207ENST00000564745 ZFAND6Q6FIF0 208 aa2.57□□□□□ -2
CDH1-207ENST00000564745 Q6ZUT4 128 aa2.57□□□□□ -2
CDH1-207ENST00000564745 PRNTQ86SH4 94 aa2.57□□□□□ -2
CDH1-207ENST00000564745 LINC00596Q86U02 117 aa2.57□□□□□ -2
CDH1-207ENST00000564745 OOSP2Q86WS3 158 aa2.57□□□□□ -2
CDH1-207ENST00000564745 PDPNQ86YL7 162 aa2.57□□□□□ -2
CDH1-207ENST00000564745 SMIM20Q8N5G0 67 aa2.57□□□□□ -2
CDH1-207ENST00000564745 LINC00337Q8N6G1 96 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TEX29Q8N6K0 151 aa2.57□□□□□ -2
CDH1-207ENST00000564745 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.57□□□□□ -2
CDH1-207ENST00000564745 OR51H1Q8NH63 302 aa2.57□□□□□ -2
CDH1-207ENST00000564745 SPTSSAQ969W0 71 aa2.57□□□□□ -2
CDH1-207ENST00000564745 BORCS8Q96FH0 119 aa2.57□□□□□ -2
CDH1-207ENST00000564745 ZC2HC1AQ96GY0 325 aa2.57□□□□□ -2
CDH1-207ENST00000564745 IGF2BP2-AS1Q96M15 143 aa2.57□□□□□ -2
CDH1-207ENST00000564745 SPANXCQ9NY87 97 aa2.57□□□□□ -2
CDH1-207ENST00000564745 TP73-AS1Q9UF72 201 aa2.57□□□□□ -2
CDH1-207ENST00000564745 CCDC88CQ9P219 2028 aa2.57□□□□□ -2
CDH1-207ENST00000564745 MYO16Q9Y6X6 1858 aa2.56□□□□□ -2
CDH1-207ENST00000564745 MDC1Q14676 2089 aaKnown RBP2.56□□□□□ -2
CDH1-207ENST00000564745 NINQ8N4C6 2090 aa2.56□□□□□ -2
CDH1-207ENST00000564745 IGKV1-12A0A0C4DH73 117 aa2.56□□□□□ -2
CDH1-207ENST00000564745 FABP5P3A8MUU1 101 aa2.56□□□□□ -2
CDH1-207ENST00000564745 IGLL5B9A064 214 aa2.56□□□□□ -2
CDH1-207ENST00000564745 FNDC10F2Z333 226 aa2.56□□□□□ -2
CDH1-207ENST00000564745 M0R1B8 84 aa2.56□□□□□ -2
CDH1-207ENST00000564745 SPINK4O60575 86 aa2.56□□□□□ -2
CDH1-207ENST00000564745 CNIH1O95406 144 aa2.56□□□□□ -2
CDH1-207ENST00000564745 APOMO95445 188 aa2.56□□□□□ -2
CDH1-207ENST00000564745 IGKV1D-12P01611 117 aa2.56□□□□□ -2
CDH1-207ENST00000564745 MT-ATP8P03928 68 aa2.56□□□□□ -2
CDH1-207ENST00000564745 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
CDH1-207ENST00000564745 HLA-DRB4P13762 266 aa2.56□□□□□ -2
CDH1-207ENST00000564745 FKBP2P26885 142 aaKnown RBP2.56□□□□□ -2
CDH1-207ENST00000564745 G6PCP35575 357 aa2.56□□□□□ -2
CDH1-207ENST00000564745 CSN1S1P47710 185 aa2.56□□□□□ -2
CDH1-207ENST00000564745 GNG3P63215 75 aa2.56□□□□□ -2
CDH1-207ENST00000564745 HBBP68871 147 aa2.56□□□□□ -2
CDH1-207ENST00000564745 ATP5G2Q06055 141 aa2.56□□□□□ -2
CDH1-207ENST00000564745 CATR1Q13166 79 aa2.56□□□□□ -2
CDH1-207ENST00000564745 PMVKQ15126 192 aa2.56□□□□□ -2
CDH1-207ENST00000564745 NNATQ16517 81 aa2.56□□□□□ -2
CDH1-207ENST00000564745 PIGYQ3MUY2 71 aa2.56□□□□□ -2
CDH1-207ENST00000564745 ETDBQ3ZM63 59 aa2.56□□□□□ -2
CDH1-207ENST00000564745 C10orf128Q5T292 105 aa2.56□□□□□ -2
CDH1-207ENST00000564745 PRR9Q5T870 116 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms