RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 WIPF1O43516 503 aa16.16■□□□□ 0.18
LINC01960-201ENST00000563759 FOXA3P55318 350 aaPredicted RBP16.15■□□□□ 0.18
LINC01960-201ENST00000563759 NUTF2P61970 127 aaKnown RBP16.15■□□□□ 0.18
LINC01960-201ENST00000563759 ANXA2RQ3ZCQ2 193 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 PRR31Q5SQ13 230 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 FAM159AQ6UWV7 190 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 FER1L6-AS1Q8NA97 138 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 BORCS7Q96B45 105 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 SRD5A3Q9H8P0 318 aa16.15■□□□□ 0.18
LINC01960-201ENST00000563759 ZNF324O75467 553 aaPredicted RBP16.14■□□□□ 0.17
LINC01960-201ENST00000563759 ANK2Q01484 3957 aa16.14■□□□□ 0.17
LINC01960-201ENST00000563759 DEFB125Q8N687 156 aa16.14■□□□□ 0.17
LINC01960-201ENST00000563759 PKD1L1Q8TDX9 2849 aa16.13■□□□□ 0.17
LINC01960-201ENST00000563759 CRXO43186 299 aaPredicted RBP16.13■□□□□ 0.17
LINC01960-201ENST00000563759 LYZL1Q6UWQ5 148 aa16.13■□□□□ 0.17
LINC01960-201ENST00000563759 ATP5L2Q7Z4Y8 100 aa16.13■□□□□ 0.17
LINC01960-201ENST00000563759 INSP01308 110 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 IGLC6P0CF74 106 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 ZNF575Q86XF7 245 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 KCNS1Q96KK3 526 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 A0A1B0GUT8 65 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 AMBPP02760 352 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 ARMS2P0C7Q2 107 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 FRMD6-AS1P0C7T7 363 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 CTRLP40313 264 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 OXLD1Q5BKU9 147 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 MDFIQ99750 246 aa16.12■□□□□ 0.17
LINC01960-201ENST00000563759 RPL35AP18077 110 aaKnown RBP16.11■□□□□ 0.17
LINC01960-201ENST00000563759 S100A4P26447 101 aaKnown RBP16.11■□□□□ 0.17
LINC01960-201ENST00000563759 ASIPP42127 132 aa16.11■□□□□ 0.17
LINC01960-201ENST00000563759 RAB4BP61018 213 aa16.11■□□□□ 0.17
LINC01960-201ENST00000563759 HBBP68871 147 aa16.11■□□□□ 0.17
LINC01960-201ENST00000563759 XCL2Q9UBD3 114 aa16.11■□□□□ 0.17
LINC01960-201ENST00000563759 CAMPP49913 170 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 WDR73Q6P4I2 378 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 CMYA5Q8N3K9 4069 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 SNURFLB1AK76 121 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 H3BVH4 76 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 RBMY1A1P0DJD3 496 aaKnown RBP16.1■□□□□ 0.17
LINC01960-201ENST00000563759 RBMY1CP0DJD4 496 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 SSTP61278 116 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 RBMY1FQ15415 496 aaKnown RBP16.1■□□□□ 0.17
LINC01960-201ENST00000563759 COX19Q49B96 90 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 RASL11AQ6T310 242 aa16.1■□□□□ 0.17
LINC01960-201ENST00000563759 IGHV1OR15-1A0A075B7D0 117 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 MUC21A0A0G2JKD1 596 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 MUC21A0A140T8X8 626 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 A0A1B0GXF2 115 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 C1orf196B1AJZ1 125 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 TRGC2P03986 189 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 RIGQ13278 110 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 TDRG1Q3Y452 100 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 LURAP1LQ8IV03 231 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 FRZBQ92765 325 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 TIMM8BQ9Y5J9 83 aaPredicted RBP16.09■□□□□ 0.17
LINC01960-201ENST00000563759 TRAPPC1Q9Y5R8 145 aa16.09■□□□□ 0.17
LINC01960-201ENST00000563759 F2Z2F3 143 aa16.08■□□□□ 0.17
LINC01960-201ENST00000563759 GNRH2O43555 120 aa16.08■□□□□ 0.17
LINC01960-201ENST00000563759 C20orf144Q9BQM9 153 aa16.08■□□□□ 0.16
LINC01960-201ENST00000563759 GNB1LQ9BYB4 327 aa16.08■□□□□ 0.16
LINC01960-201ENST00000563759 MT-ND6P03923 174 aa16.07■□□□□ 0.16
LINC01960-201ENST00000563759 FABP9Q0Z7S8 132 aa16.06■□□□□ 0.16
LINC01960-201ENST00000563759 MORN3Q6PF18 240 aaPredicted RBP16.06■□□□□ 0.16
LINC01960-201ENST00000563759 TMEM136Q6ZRR5 245 aa16.06■□□□□ 0.16
LINC01960-201ENST00000563759 A0A1B0GW15 77 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 CBY3A6NI87 242 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 HLA-DQA1P01909 254 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 S100A8P05109 93 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 OR5AL1P0C617 328 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 HTN1P15515 57 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 RAB5BP61020 215 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 Q8N1Y9 231 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 TMEM208Q9BTX3 173 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 TP53TG3Q9ULZ0 132 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 SNAI2O43623 268 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 TWIST1Q15672 202 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 ZFP82Q8N141 532 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 OR10AG1Q8NH19 301 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 C1QTNF4Q9BXJ3 329 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 CNFNQ9BYD5 112 aa16.05■□□□□ 0.16
LINC01960-201ENST00000563759 MRPL18Q9H0U6 180 aaKnown RBP16.05■□□□□ 0.16
LINC01960-201ENST00000563759 DNLZQ5SXM8 178 aa16.04■□□□□ 0.16
LINC01960-201ENST00000563759 LINC01587Q99440 93 aa16.04■□□□□ 0.16
LINC01960-201ENST00000563759 SSBP4Q9BWG4 385 aaPredicted RBP16.04■□□□□ 0.16
LINC01960-201ENST00000563759 MUC4Q99102 2169 aa16.04■□□□□ 0.16
LINC01960-201ENST00000563759 TRGV11A0A075B6L2 103 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 MED14OSP0DP75 135 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 NTF3P20783 257 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 PHLDA3Q9Y5J5 127 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 RNASE3P12724 160 aaKnown RBP16.03■□□□□ 0.16
LINC01960-201ENST00000563759 SPANXN1Q5VSR9 72 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 TMEM256Q8N2U0 113 aa16.03■□□□□ 0.16
LINC01960-201ENST00000563759 IGHV3OR16-12A0A075B7B8 117 aa16.02■□□□□ 0.16
LINC01960-201ENST00000563759 ZMAT5Q9UDW3 170 aaKnown RBP16.02■□□□□ 0.16
LINC01960-201ENST00000563759 IGHV3-16A0A0C4DH30 117 aa16.01■□□□□ 0.15
LINC01960-201ENST00000563759 CACNG7P62955 275 aa16.01■□□□□ 0.15
LINC01960-201ENST00000563759 CTAG1AP78358 180 aa16.01■□□□□ 0.15
LINC01960-201ENST00000563759 EGFEM1PQ0D2K5 195 aa16.01■□□□□ 0.15
LINC01960-201ENST00000563759 GIG44P09565 113 aaPredicted RBP16.01■□□□□ 0.15
LINC01960-201ENST00000563759 MDFICQ9P1T7 246 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms