RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 ADAMTSL5Q6ZMM2 481 aa10.37□□□□□ -0.75
SMPD3-205ENST00000563455 SMIM15Q7Z3B0 74 aa10.37□□□□□ -0.75
SMPD3-205ENST00000563455 PACRGQ96M98 296 aaPredicted RBP10.37□□□□□ -0.75
SMPD3-205ENST00000563455 TRRAPQ9Y4A5 3859 aa10.36□□□□□ -0.75
SMPD3-205ENST00000563455 A8MTW9 85 aa10.36□□□□□ -0.75
SMPD3-205ENST00000563455 ZNF688P0C7X2 276 aa10.36□□□□□ -0.75
SMPD3-205ENST00000563455 CAMPP49913 170 aa10.36□□□□□ -0.75
SMPD3-205ENST00000563455 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
SMPD3-205ENST00000563455 SSBP4Q9BWG4 385 aaPredicted RBP10.36□□□□□ -0.75
SMPD3-205ENST00000563455 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 SPINK4O60575 86 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 ESDP10768 282 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 CDKN1BP46527 198 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 KRTAP10-3P60369 221 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 TMEM18Q96B42 140 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 C20orf144Q9BQM9 153 aa10.35□□□□□ -0.75
SMPD3-205ENST00000563455 PPBPP02775 128 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 HLA-DRB4P13762 266 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 TFPI2P48307 235 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 TDRG1Q3Y452 100 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 FAM159AQ6UWV7 190 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 TMEM191AQ9H0A3 160 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 HLA-DRB4X5D2U9 266 aa10.34□□□□□ -0.75
SMPD3-205ENST00000563455 IGKV3D-20A0A0C4DH25 116 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 A0A1W2PRX2 142 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 C7orf71A4D174 169 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 SNAI2O43623 268 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 RNASE4P34096 147 aaKnown RBP10.33□□□□□ -0.76
SMPD3-205ENST00000563455 ASIPP42127 132 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 NUTF2P61970 127 aaKnown RBP10.33□□□□□ -0.76
SMPD3-205ENST00000563455 CD300EQ496F6 205 aaPredicted RBP10.33□□□□□ -0.76
SMPD3-205ENST00000563455 BAGE3Q86Y29 109 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 LAMTOR2Q9Y2Q5 125 aa10.33□□□□□ -0.76
SMPD3-205ENST00000563455 LOC102724200A0A096LPH7 203 aaPredicted RBP10.32□□□□□ -0.76
SMPD3-205ENST00000563455 ADARB2-AS1A8MUL3 147 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 PF4P02776 101 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 ARMS2P0C7Q2 107 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 GZMBP10144 247 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 EDN2P20800 178 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 S100A4P26447 101 aaKnown RBP10.32□□□□□ -0.76
SMPD3-205ENST00000563455 HIST3H2BBQ8N257 126 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 MCRIP2Q9BUT9 160 aaKnown RBP10.32□□□□□ -0.76
SMPD3-205ENST00000563455 TPPP3Q9BW30 176 aa10.32□□□□□ -0.76
SMPD3-205ENST00000563455 TMSB15BA0A087X1C1 80 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 IGLV1-51P01701 117 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 NTF3P20783 257 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 AKR1D1P51857 326 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 DEFB131AP59861 70 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 SLAQ13239 276 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 TWIST1Q15672 202 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 FAM104BQ5XKR9 115 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 DUX3Q96PT4 197 aa10.31□□□□□ -0.76
SMPD3-205ENST00000563455 ALKBH7Q9BT30 221 aaPredicted RBP10.31□□□□□ -0.76
SMPD3-205ENST00000563455 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
SMPD3-205ENST00000563455 OR11H12B2RN74 326 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 F6UB75 175 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 H3BMM0 161 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 SAP30O75446 220 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 ZNF705DP0CH99 300 aaPredicted RBP10.3□□□□□ -0.76
SMPD3-205ENST00000563455 ZNF705BP0CI00 300 aaPredicted RBP10.3□□□□□ -0.76
SMPD3-205ENST00000563455 SMIM6P0DI80 62 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 RAB4AP20338 218 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 PMCHP20382 165 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 SRIP30626 198 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 LINC00467Q9BRT7 94 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
SMPD3-205ENST00000563455 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
SMPD3-205ENST00000563455 PPP1R17O96001 155 aa10.29□□□□□ -0.76
SMPD3-205ENST00000563455 NSUN5P1Q3KNT7 163 aa10.29□□□□□ -0.76
SMPD3-205ENST00000563455 SPANXN1Q5VSR9 72 aa10.29□□□□□ -0.76
SMPD3-205ENST00000563455 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
SMPD3-205ENST00000563455 VWFP04275 2813 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 TRGV11A0A075B6L2 103 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 GDF5OSQ5U4N7 250 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 SCRT2Q9NQ03 307 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 C11orf21Q9P2W6 132 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 TP53TG3Q9ULZ0 132 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 U3KQK5 164 aa10.28□□□□□ -0.76
SMPD3-205ENST00000563455 IGHV1OR15-1A0A075B7D0 117 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 GRIFINA4D1Z8 144 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 FRMD6-AS1P0C7T7 363 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 C9orf66Q5T8R8 295 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 ZNF575Q86XF7 245 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 TMEM256Q8N2U0 113 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 LINC00482Q8N8I6 264 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 SYT8Q8NBV8 401 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 C18orf32Q8TCD1 76 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 HIST1H2BLQ99880 126 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 NDUFAF3Q9BU61 184 aa10.27□□□□□ -0.77
SMPD3-205ENST00000563455 CD33P20138 364 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
SMPD3-205ENST00000563455 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms