RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GAGE7O76087 117 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 LTAP01374 205 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 ATP5G1P05496 136 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
CLK3-207ENST00000562389 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 BLOC1S1P78537 153 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 Q6ZTI0 123 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 SDF2L1Q9HCN8 221 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
CLK3-207ENST00000562389 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 TYMSP04818 313 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 LINC00476Q8WZB0 136 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 C11orf52Q96A22 123 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
CLK3-207ENST00000562389 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
CLK3-207ENST00000562389 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 IGHV3-16A0A0C4DH30 117 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 GNRH2O43555 120 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 BCL2P10415 239 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 TAGLN2P37802 199 aaKnown RBP11.79□□□□□ -0.52
CLK3-207ENST00000562389 MEF2BQ02080 365 aaPredicted RBP11.79□□□□□ -0.52
CLK3-207ENST00000562389 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 ZC2HC1AQ96GY0 325 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 SPXQ9BT56 116 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 ALMS1Q8TCU4 4167 aa11.79□□□□□ -0.52
CLK3-207ENST00000562389 RYR3Q15413 4870 aa11.78□□□□□ -0.52
CLK3-207ENST00000562389 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
CLK3-207ENST00000562389 F5H768 121 aa11.78□□□□□ -0.52
CLK3-207ENST00000562389 PDE6DO43924 150 aa11.77□□□□□ -0.53
CLK3-207ENST00000562389 LGALS9CQ6DKI2 356 aa11.77□□□□□ -0.53
CLK3-207ENST00000562389 TMEM88Q6PEY1 159 aa11.77□□□□□ -0.53
CLK3-207ENST00000562389 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
CLK3-207ENST00000562389 VAX2Q9UIW0 290 aa11.77□□□□□ -0.53
CLK3-207ENST00000562389 TRGV2A0A075B6R0 118 aa11.76□□□□□ -0.53
CLK3-207ENST00000562389 CRIP1P50238 77 aa11.76□□□□□ -0.53
CLK3-207ENST00000562389 ZNF674Q2M3X9 581 aa11.76□□□□□ -0.53
CLK3-207ENST00000562389 FAM162BQ5T6X4 162 aa11.76□□□□□ -0.53
CLK3-207ENST00000562389 IGKV3D-20A0A0C4DH25 116 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 SH2D1AO60880 128 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 LY6G6CO95867 125 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
CLK3-207ENST00000562389 BAGE2Q86Y30 109 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 C15orf53Q8NAA6 179 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 RASL10AQ92737 203 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
CLK3-207ENST00000562389 M0R2P5 195 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 HOXA5P20719 270 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 NHLRC2Q8NBF2 726 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 C9orf85Q96MD7 179 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 MUC4Q99102 2169 aa11.74□□□□□ -0.53
CLK3-207ENST00000562389 SACSQ9NZJ4 4579 aa11.73□□□□□ -0.53
CLK3-207ENST00000562389 B4DEV8 164 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 KRBOX1C9JBD0 128 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 ORM1P02763 201 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
CLK3-207ENST00000562389 OR5I1Q13606 314 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 TEX261Q6UWH6 196 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 DNAH1Q9P2D7 4330 aa11.72□□□□□ -0.53
CLK3-207ENST00000562389 RBFOX3A6NFN3 312 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 ASIPP42127 132 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 CENPWQ5EE01 88 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 ZNF506Q5JVG8 444 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 DNLZQ5SXM8 178 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 PTH2Q96A98 100 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 SMIM12Q96EX1 92 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 MED9Q9NWA0 146 aa11.71□□□□□ -0.53
CLK3-207ENST00000562389 TRAV26-1A0A087WT03 109 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 H3BNG1 76 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 M0R036 132 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 P0DMU3 169 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 FAM231AP0DMU4 169 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 FAM231CP0DMU5 169 aa11.7□□□□□ -0.54
CLK3-207ENST00000562389 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
CLK3-207ENST00000562389 TRAV4A0A0B4J268 109 aa11.69□□□□□ -0.54
CLK3-207ENST00000562389 IGLV2-8P01709 118 aa11.69□□□□□ -0.54
CLK3-207ENST00000562389 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
CLK3-207ENST00000562389 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
CLK3-207ENST00000562389 A0A0J9YY99 117 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 RAB19A4D1S5 217 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 TMEM250H0YL14 139 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
CLK3-207ENST00000562389 GNG4P50150 75 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 ZNF575Q86XF7 245 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 POM121L12Q8N7R1 296 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 FAM210AQ96ND0 272 aa11.68□□□□□ -0.54
CLK3-207ENST00000562389 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 H3BVH4 76 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 NUDT3O95989 172 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 CXCL1P09341 107 aa11.67□□□□□ -0.54
CLK3-207ENST00000562389 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms