RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 PCNPQ8WW12 178 aaKnown RBP5.72□□□□□ -1.49
GINS3-204ENST00000561952 FAM19A4Q96LR4 140 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 KRTAP1-5Q9BYS1 174 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 Q9H3A6 140 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 WFDC1Q9HC57 220 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 ZNF492Q9P255 531 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 NAGKQ9UJ70 344 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 RYR1P21817 5038 aa5.71□□□□□ -1.49
GINS3-204ENST00000561952 RAB19A4D1S5 217 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 HMGB3O15347 200 aaKnown RBP5.71□□□□□ -1.5
GINS3-204ENST00000561952 CRISP2P16562 243 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 ZNF138P52744 262 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 TCL1AP56279 114 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 ZNF415Q09FC8 603 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 ZNF266Q14584 549 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 KHDC3LQ587J8 217 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 FAM74A1Q5RGS3 127 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 LYPD6BQ8NI32 183 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 TMED6Q8WW62 240 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 ZNF503Q96F45 646 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 VSIG2Q96IQ7 327 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 DNAH5Q8TE73 4624 aa5.71□□□□□ -1.5
GINS3-204ENST00000561952 F6UZH7 168 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 SPINK4O60575 86 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 RAB5CP51148 216 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 RAB2AP61019 212 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 BLOC1S1P78537 153 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 ANXA2RQ3ZCQ2 193 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 TOR2AQ5JU69 321 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 UQCC3Q6UW78 93 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
GINS3-204ENST00000561952 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
GINS3-204ENST00000561952 KRBOX1C9JBD0 128 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 DIRC3C9JPN6 131 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 SFTA3P0C7M3 94 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 TAS2R45P59539 299 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 GNG5P63218 68 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 TMEM183BQ1AE95 376 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 TTC32Q5I0X7 151 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 IBA57Q5T440 356 aaKnown RBP5.69□□□□□ -1.5
GINS3-204ENST00000561952 SPATA12Q7Z6I5 190 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 TMEM183AQ8IXX5 376 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 CMTM2Q8TAZ6 248 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 MDFICQ9P1T7 246 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 MRPS16Q9Y3D3 137 aaKnown RBP5.69□□□□□ -1.5
GINS3-204ENST00000561952 ICOSQ9Y6W8 199 aa5.69□□□□□ -1.5
GINS3-204ENST00000561952 TRAV8-1A0A0A6YYK1 113 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 TRGV4A0A0C4DH28 118 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 A0A1W2PPV4 95 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 PGPA6NDG6 321 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 UMAD1C9J7I0 102 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 TEX46H3BTG2 121 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 NXPH4O95158 308 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 ATP6V0CP27449 155 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 ACOT6Q3I5F7 207 aaPredicted RBP5.68□□□□□ -1.5
GINS3-204ENST00000561952 FAM159AQ6UWV7 190 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 GOLT1AQ6ZVE7 132 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 HSD17B11Q8NBQ5 300 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
GINS3-204ENST00000561952 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 H3BNG1 76 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 SIVA1O15304 175 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 FUSP35637 526 aaKnown RBP eCLIP5.67□□□□□ -1.5
GINS3-204ENST00000561952 LINC00315P59091 139 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 DPPA3Q6W0C5 159 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 LYPD1Q8N2G4 141 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 OR10G4Q8NGN3 311 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 OR10G9Q8NGN4 311 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 OR10G7Q8NGN6 311 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 ZNF479Q96JC4 524 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
GINS3-204ENST00000561952 OTORQ9NRC9 128 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 HHLA3Q9XRX5 114 aa5.67□□□□□ -1.5
GINS3-204ENST00000561952 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 IGHV3-16A0A0C4DH30 117 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 GNRH2O43555 120 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 SRIP30626 198 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 CDC34P49427 236 aaPredicted RBP5.66□□□□□ -1.5
GINS3-204ENST00000561952 CRYBA4P53673 196 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 SERF2P84101 59 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 FHL2Q14192 279 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 C10orf91Q5T1B1 145 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 Q6AWC8 147 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 IQCF2Q8IXL9 164 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 OR2G3Q8NGZ4 309 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 C18orf15Q96N68 181 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 SH3BGRL3Q9H299 93 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
GINS3-204ENST00000561952 TRAV1-1A0A0B4J248 108 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 TRBV7-9A0A0J9YWB2 115 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 LOC100131303A0A0U1RQF7 123 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 K7EQD1 137 aa5.65□□□□□ -1.5
GINS3-204ENST00000561952 TYMSP04818 313 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms