RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 PRSS29PA6NIE9 313 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 NXPH4O95158 308 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 FRMD6-AS1P0C7T7 363 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 EGR2P11161 476 aaPredicted RBP8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 E7EQL1 145 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 APOC4P55056 127 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 WFDC2Q14508 124 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 SS18Q15532 418 aa8.09□□□□□ -1.12
GTF3C1-202ENST00000561623 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.12
GTF3C1-202ENST00000561623 HELZP42694 1942 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 CHD3Q12873 2000 aaKnown RBP8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 CFC1BP0CG36 223 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 CFC1P0CG37 223 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 CFHR4Q92496 578 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 UBL5Q9BZL1 73 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 TICRRQ7Z2Z1 1910 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 BOD1L2Q8IYS8 172 aa8.08□□□□□ -1.12
GTF3C1-202ENST00000561623 FXYD2P54710 66 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 TSC2P49815 1807 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 K7EM74 188 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 IGHG3P01860 377 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 DYNAPQ8N1N2 210 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 RNF183Q96D59 192 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 TRAV25A0A0B4J276 109 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 NOTCH2Q04721 2471 aa8.07□□□□□ -1.12
GTF3C1-202ENST00000561623 IGHV1OR15-1A0A075B7D0 117 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 FOXE3Q13461 319 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 LINC01545Q5VT33 79 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 ZNRF2Q8NHG8 242 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 CRLF1O75462 422 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 MGAMO43451 1857 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 C22orf46C9J442 243 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 LOXP28300 417 aaPredicted RBP8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 USF3Q68DE3 2245 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 WNK2Q9Y3S1 2297 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 OTOGLQ3ZCN5 2332 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 CHKB-CPT1BH3BT56 60 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 GNRH2O43555 120 aa8.06□□□□□ -1.12
GTF3C1-202ENST00000561623 IGF2BP2-AS1Q96M15 143 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 ZNF491Q8N8L2 437 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 FAM208BQ5VWN6 2430 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 hADV29S1A0JD25 119 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 IGHG4P01861 327 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 IGFBPL1Q8WX77 278 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 HIST2H2BCQ6DN03 193 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 NRGNQ92686 78 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 FGF23Q9GZV9 251 aaPredicted RBP8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 ZNF493Q6ZR52 646 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 C20orf78Q9BR46 151 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 Q8TCH9 128 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 MSRB1Q9NZV6 116 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 PLXNA4Q9HCM2 1894 aa8.05□□□□□ -1.12
GTF3C1-202ENST00000561623 F6UB75 175 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 PKDREJQ9NTG1 2253 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 BAALC-AS2P0C853 105 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 IL17DQ8TAD2 202 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 NOTCH3Q9UM47 2321 aa8.04□□□□□ -1.12
GTF3C1-202ENST00000561623 ROS1P08922 2347 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 ZGRF1Q86YA3 2104 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 G3V4G9 280 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 GTSF1Q8WW33 167 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 IGLV3-9A0A075B6K5 115 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 PLCE1Q9P212 2302 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 RHODO00212 210 aa8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 RBM3P98179 157 aaKnown RBP8.03□□□□□ -1.12
GTF3C1-202ENST00000561623 SHISA9B4DS77 424 aa8.02□□□□□ -1.12
GTF3C1-202ENST00000561623 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.12
GTF3C1-202ENST00000561623 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 IGKV2-29A2NJV5 120 aaPredicted RBP8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 IGLV2-23P01705 113 aa8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 KMT2EQ8IZD2 1858 aa8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 TRAV13-2A0A0B4J235 113 aa8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 LINC00311Q8N616 119 aa8.02□□□□□ -1.13
GTF3C1-202ENST00000561623 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 MUSTN1Q8IVN3 82 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 Q9HAA7 133 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 GATA3P23771 443 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 UBE2E1P51965 193 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 SPRNQ5BIV9 151 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 PATE2Q6UY27 113 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 DSCR8Q96T75 97 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 TMEM243Q9BU79 118 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 TMEM258P61165 79 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 GP9P14770 177 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 FOXI1Q12951 378 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 POU2AF1Q16633 256 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 Q9H8V8 135 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 PLXNA2O75051 1894 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 FNDC1Q4ZHG4 1894 aaPredicted RBP8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 RLFQ13129 1914 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 FAM236AA0A1B0GUQ0 79 aa8.01□□□□□ -1.13
GTF3C1-202ENST00000561623 FAM236BA0A1B0GV22 79 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms