RNA–Protein interactions for RNA: ENST00000561050.5

PCK2-215, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, human

TSL 2

Gene PCK2, Length 1,856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCK2-215	ENST00000561050	TSKU	Q8WUA8	353 aa		13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	DAZAP1	Q96EP5	407 aa	Known RBP	13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	RPP21	Q9H633	154 aa	Known RBP	13.95	□□□□□ -0.18
PCK2-215	ENST00000561050		P01737	135 aa		13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	RNASE4	P34096	147 aa	Known RBP	13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	CDKN1B	P46527	198 aa		13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	FABP9	Q0Z7S8	132 aa		13.95	□□□□□ -0.18
PCK2-215	ENST00000561050	TRAV12-2	A0A075B6T6	113 aa		13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	IGKV3D-20	A0A0C4DH25	116 aa		13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	GIG44	P09565	113 aa	Predicted RBP	13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	TCL1A	P56279	114 aa		13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	GFI1B	Q5VTD9	330 aa		13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	TRAPPC1	Q9Y5R8	145 aa		13.94	□□□□□ -0.18
PCK2-215	ENST00000561050	LEP	P41159	167 aa		13.93	□□□□□ -0.18
PCK2-215	ENST00000561050	NDUFA6	P56556	154 aa		13.93	□□□□□ -0.18
PCK2-215	ENST00000561050	FXYD7	P58549	80 aa		13.93	□□□□□ -0.18
PCK2-215	ENST00000561050	NAT8B	Q9UHF3	227 aa		13.93	□□□□□ -0.18
PCK2-215	ENST00000561050	STH	Q8IWL8	128 aa		13.93	□□□□□ -0.18
PCK2-215	ENST00000561050		A8MWL6	223 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050		G3V4G9	280 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	RBMY1A1	P0DJD3	496 aa	Known RBP	13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	RBMY1C	P0DJD4	496 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	RBMY1F	Q15415	496 aa	Known RBP	13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	COX19	Q49B96	90 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	SAMD5	Q5TGI4	173 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	GTSF1	Q8WW33	167 aa		13.92	□□□□□ -0.18
PCK2-215	ENST00000561050	TSPO	P30536	169 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	LINC01559	Q495D7	138 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	GTSCR1	Q86UQ5	136 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	OR2D3	Q8NGH3	330 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	NEU1	Q99519	415 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	GNB1L	Q9BYB4	327 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	TRAV12-3	A0A0B4J271	114 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	C7orf71	A4D174	169 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	HOXA5	P20719	270 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	GFRA4	Q9GZZ7	299 aa		13.91	□□□□□ -0.18
PCK2-215	ENST00000561050	MGAM2	Q2M2H8	2515 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	TRAV21	A0A0B4J279	112 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	FAM231B	A6NCW3	169 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	GZMB	P10144	247 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	FOXA3	P55318	350 aa	Predicted RBP	13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	KRTAP21-3	Q3LHN1	58 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	WDR73	Q6P4I2	378 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	NUP35	Q8NFH5	326 aa		13.9	□□□□□ -0.18
PCK2-215	ENST00000561050	HIGD1C	A8MV81	97 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	MT-ND6	P03923	174 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	RASL11A	Q6T310	242 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	DNAH3	Q8TD57	4116 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	TMEM189	A5PLL7	270 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	SPINK4	O60575	86 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	ORM1	P02763	201 aa		13.89	□□□□□ -0.19
PCK2-215	ENST00000561050	FRMD6-AS1	P0C7T7	363 aa		13.88	□□□□□ -0.19
PCK2-215	ENST00000561050	AKR1D1	P51857	326 aa		13.88	□□□□□ -0.19
PCK2-215	ENST00000561050	DNHD1	Q96M86	4753 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	TMSB15B	A0A087X1C1	80 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	SNURFL	B1AK76	121 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	RPL35A	P18077	110 aa	Known RBP	13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	NOTCH1	P46531	2555 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	ANXA2R	Q3ZCQ2	193 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	MRPL54	Q6P161	138 aa	Known RBP	13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	NBEAL1	Q6ZS30	2694 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	MRPL18	Q9H0U6	180 aa	Known RBP	13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	COA6	Q5JTJ3	125 aa	Known RBP	13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	TMEM136	Q6ZRR5	245 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	ATP5L2	Q7Z4Y8	100 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	XCL2	Q9UBD3	114 aa		13.87	□□□□□ -0.19
PCK2-215	ENST00000561050	TDRG1	Q3Y452	100 aa		13.86	□□□□□ -0.19
PCK2-215	ENST00000561050	MUC21	Q5SSG8	566 aa		13.86	□□□□□ -0.19
PCK2-215	ENST00000561050	CSNK1G2-AS1	Q8NCQ2	148 aa		13.86	□□□□□ -0.19
PCK2-215	ENST00000561050	XKRY2	A2RUG3	117 aa		13.85	□□□□□ -0.19
PCK2-215	ENST00000561050	GRIFIN	A4D1Z8	144 aa		13.85	□□□□□ -0.19
PCK2-215	ENST00000561050	GNRH2	O43555	120 aa		13.85	□□□□□ -0.19
PCK2-215	ENST00000561050	IGLC6	P0CF74	106 aa		13.85	□□□□□ -0.19
PCK2-215	ENST00000561050	C1orf158	Q8N1D5	194 aa		13.85	□□□□□ -0.19
PCK2-215	ENST00000561050	HLA-DQA1	P01909	254 aa		13.84	□□□□□ -0.19
PCK2-215	ENST00000561050	NUTF2	P61970	127 aa	Known RBP	13.84	□□□□□ -0.19
PCK2-215	ENST00000561050	TP53TG3	Q9ULZ0	132 aa		13.84	□□□□□ -0.19
PCK2-215	ENST00000561050		A0A1B0GXF2	115 aa		13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	AMBP	P02760	352 aa		13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	PRM2	P04554	102 aa		13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	S100A8	P05109	93 aa		13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	RPS20	P60866	119 aa	Known RBP	13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	HIST3H2BB	Q8N257	126 aa		13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.83	□□□□□ -0.2
PCK2-215	ENST00000561050	RAB4B	P61018	213 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	DNLZ	Q5SXM8	178 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	MORN3	Q6PF18	240 aa	Predicted RBP	13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	NAGK	Q9UJ70	344 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	IGHV1OR15-1	A0A075B7D0	117 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	IFITM10	A6NMD0	228 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	PGLYRP4	Q96LB8	373 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	C20orf144	Q9BQM9	153 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	CSTL1	Q9H114	145 aa		13.82	□□□□□ -0.2
PCK2-215	ENST00000561050	IGHV4-30-4	P0DP06	118 aa		13.81	□□□□□ -0.2
PCK2-215	ENST00000561050	KPRP	Q5T749	579 aa	Predicted RBP	13.81	□□□□□ -0.2
PCK2-215	ENST00000561050	INS	P01308	110 aa		13.8	□□□□□ -0.2
PCK2-215	ENST00000561050	RNASE3	P12724	160 aa	Known RBP	13.8	□□□□□ -0.2
PCK2-215	ENST00000561050	HBB	P68871	147 aa		13.8	□□□□□ -0.2
PCK2-215	ENST00000561050	LYZL1	Q6UWQ5	148 aa		13.8	□□□□□ -0.2
PCK2-215	ENST00000561050	FAM159A	Q6UWV7	190 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms