RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SMUG1Q53HV7 270 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 TMEM75Q8N9X5 138 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 HIST1H2BAQ96A08 127 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 C8orf49Q96NF6 230 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 LINC00467Q9BRT7 94 aa6.4□□□□□ -1.38
SNRPA1-214ENST00000560987 RYR2Q92736 4967 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 TRGV11A0A075B6L2 103 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 GNRH2O43555 120 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 NUDT3O95989 172 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 GCGP01275 180 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 ZNF415Q09FC8 603 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 Q6AWC8 147 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 LGALS9CQ6DKI2 356 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 Q6ZTI0 123 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 UBE2DNLQ8IWF7 75 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 LINC00476Q8WZB0 136 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 KCNS1Q96KK3 526 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 FAM210BQ96KR6 192 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 SDF2L1Q9HCN8 221 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
SNRPA1-214ENST00000560987 FABP5P3A8MUU1 101 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 AKR1C3P42330 323 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 SULT1A2P50226 295 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 NKX2-5P52952 324 aaPredicted RBP6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 TCL1AP56279 114 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 IBA57Q5T440 356 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 TMEM88Q6PEY1 159 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 MRPL16Q9NX20 251 aaKnown RBP6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 MDFICQ9P1T7 246 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 ARL2-SNX15V9GYD0 113 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
SNRPA1-214ENST00000560987 IGLV2-11P01706 119 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 IGHV3-53P01767 116 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 ORM1P02763 201 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 PFN1P07737 140 aaKnown RBP6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 P0DMU3 169 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 FAM231AP0DMU4 169 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 FAM231CP0DMU5 169 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 ZNF80P51504 273 aaPredicted RBP6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 CCL20P78556 96 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 C9orf62Q8N4C0 152 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 FMC1Q96HJ9 113 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 SPXQ9BT56 116 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 ZFP30Q9Y2G7 519 aa6.37□□□□□ -1.39
SNRPA1-214ENST00000560987 A0A0J9YY99 117 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 SPINK4O60575 86 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 IFNA1P01562 189 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 S100A9P06702 114 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 S100A4P26447 101 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 LGALS9BQ3B8N2 356 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 ALKAL2Q6UX46 152 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 C15orf53Q8NAA6 179 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 TCEAL7Q9BRU2 100 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 MANBALQ9NQG1 85 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 SACSQ9NZJ4 4579 aa6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 DYNC2H1Q8NCM8 4307 aaKnown RBP6.36□□□□□ -1.39
SNRPA1-214ENST00000560987 TRAV26-1A0A087WT03 109 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 TRAV1-1A0A0B4J248 108 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 IGHV3-16A0A0C4DH30 117 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 C9JCJ5 164 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 TYMSP04818 313 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 BLOC1S1P78537 153 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 TDRG1Q3Y452 100 aa6.35□□□□□ -1.39
SNRPA1-214ENST00000560987 STARD9Q9P2P6 4700 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 B4DEV8 164 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 M0R036 132 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 M0R2P5 195 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 PAX4O43316 350 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 HOXA5P20719 270 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 FAM162BQ5T6X4 162 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 Q86TA4 180 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 BAGE2Q86Y30 109 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 LINC00612Q8N6U2 182 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 POM121L12Q8N7R1 296 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 NHLRC2Q8NBF2 726 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 OR4C5Q8NGB2 326 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 ZC2HC1AQ96GY0 325 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 C11orf21Q9P2W6 132 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 HHLA3Q9XRX5 114 aa6.34□□□□□ -1.39
SNRPA1-214ENST00000560987 NACAE9PAV3 2078 aa6.34□□□□□ -1.4
SNRPA1-214ENST00000560987 TMSB15BA0A087X1C1 80 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 TRBV6-1A0A0K0K1D8 114 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 M0R2N4 97 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 SH2D1AO60880 128 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 SFTA3P0C7M3 94 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 CCL18P55774 89 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 SLAQ13239 276 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 ZNF876PQ49A33 203 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 TXNDC17Q9BRA2 123 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 MED9Q9NWA0 146 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 VAX2Q9UIW0 290 aa6.33□□□□□ -1.4
SNRPA1-214ENST00000560987 PDE6DO43924 150 aa6.32□□□□□ -1.4
SNRPA1-214ENST00000560987 LTAP01374 205 aa6.32□□□□□ -1.4
SNRPA1-214ENST00000560987 MGST1P10620 155 aaKnown RBP6.32□□□□□ -1.4
SNRPA1-214ENST00000560987 ASIPP42127 132 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms