RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	SIRPD	Q9H106	197 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	NCKAP5	O14513	1909 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	TSPAN13	O95857	204 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	SLURP1	P55000	103 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	CRIP3	Q6Q6R5	217 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	TMEM141	Q96I45	108 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	IGHV3-38	A0A0C4DH36	116 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	MYMX	A0A1B0GTQ4	84 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328	CFHR4	Q92496	578 aa		7.29	□□□□□ -1.24
NEO1-208	ENST00000560328		Q6ZWC4	215 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	EML6	Q6ZMW3	1958 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	APOC4	P55056	127 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328		Q6ZPA2	131 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	PRIMA1	Q86XR5	153 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	TRBV25-1	A0A075B6N4	114 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	CRYGC	P07315	174 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	CHAC1	Q9BUX1	264 aa		7.28	□□□□□ -1.24
NEO1-208	ENST00000560328	INS-IGF2	F8WCM5	200 aa		7.27	□□□□□ -1.24
NEO1-208	ENST00000560328	PMVK	Q15126	192 aa		7.27	□□□□□ -1.24
NEO1-208	ENST00000560328	IGKV1OR2-108	A0A075B7D4	117 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	C19orf84	I3L1E1	186 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	BUB3	O43684	328 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	SMIM2	Q9BVW6	85 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	LENEP	Q9Y5L5	61 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	TRAV8-2	A0A0B4J237	113 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	MEGF9	Q9H1U4	602 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	JPT2	Q9H910	190 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	PCNX3	Q9H6A9	2034 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	FAM167A-AS1	Q96KT0	104 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	MRPL36	Q9P0J6	103 aa	Known RBP	7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	GHRH	P01286	108 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	PYGO2	Q9BRQ0	406 aa		7.27	□□□□□ -1.25
NEO1-208	ENST00000560328	WI2-2373I1.2	A0A1W2PRP0	233 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	CGB3	P0DN86	165 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	CGB7	P0DN87	165 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	UTF1	Q5T230	341 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	PGPEP1	Q9NXJ5	209 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	GOLGB1	Q14789	3259 aa	Known RBP	7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	C16orf54	Q6UWD8	224 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	APRG1	Q8IVJ8	170 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	PROP1	O75360	226 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	KIR3DS1	Q14943	382 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	SPRY2	O43597	315 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	ZNF625	Q96I27	306 aa	Predicted RBP	7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	C20orf144	Q9BQM9	153 aa		7.26	□□□□□ -1.25
NEO1-208	ENST00000560328	WIPF2	Q8TF74	440 aa	Predicted RBP	7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	CST9L	Q9H4G1	147 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	LINC00574	Q9H8X3	128 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	NOTCH2	Q04721	2471 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	HLA-DRB4	P13762	266 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	C10orf126	Q8N4M7	172 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	C20orf78	Q9BR46	151 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	TMEM243	Q9BU79	118 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	C11orf1	Q9H5F2	150 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	HLA-DRB4	X5D2U9	266 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	PSCA	O43653	123 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	LMO4	P61968	165 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	PTPRS	Q13332	1948 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	KMT2E	Q8IZD2	1858 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	SRSF2	Q01130	221 aa	Known RBP	7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	ATXN8	Q156A1	80 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	CACNA1A	O00555	2505 aa		7.25	□□□□□ -1.25
NEO1-208	ENST00000560328	IGHV4OR15-8	A0A075B7B6	117 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328		A0A087WW49	117 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	LEPROT	O15243	131 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	IGHG2	P01859	326 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328		P0C879	139 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	BRWD1-AS2	P59051	145 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	GAGE6	Q13070	117 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	GATD1	Q8NB37	220 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	CEP192	Q8TEP8	1941 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	SPAG8	Q99932	426 aa	Predicted RBP	7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	NOP10	Q9NPE3	64 aa	Known RBP	7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	LGALS9B	Q3B8N2	356 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	LGALS9C	Q6DKI2	356 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	IGF2BP2-AS1	Q96M15	143 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	MRPL35	Q9NZE8	188 aa	Known RBP	7.24	□□□□□ -1.25
NEO1-208	ENST00000560328		U3KQE9	123 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	DYSF	O75923	2080 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	VWC2L	B2RUY7	222 aa		7.24	□□□□□ -1.25
NEO1-208	ENST00000560328	FANCD2OS	Q96PS1	177 aa		7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	PRAC2	D3DTV9	90 aa		7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	MRPL52	Q86TS9	123 aa	Known RBP	7.23	□□□□□ -1.25
NEO1-208	ENST00000560328		A0A096LPF7	62 aa		7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	CD5L	O43866	347 aa		7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	IGLL1	P15814	213 aa		7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.23	□□□□□ -1.25
NEO1-208	ENST00000560328	ODF3B	A8MYP8	253 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	IGLC2	P0DOY2	106 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	IGLC3	P0DOY3	106 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328		A6NDX4	124 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	GATA1	P15976	413 aa	Predicted RBP	7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	PLA2G5	P39877	138 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	KLF5	Q13887	457 aa	Predicted RBP	7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	EREG	O14944	169 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	PCP4	P48539	62 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	NUP210L	Q5VU65	1888 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	MED12L	Q86YW9	2145 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328	C2orf70	A6NJV1	201 aa		7.22	□□□□□ -1.25
NEO1-208	ENST00000560328		K7EMT4	169 aa		7.22	□□□□□ -1.25

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