RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 ELOBQ15370 118 aa8.92□□□□□ -0.98
HERC1-205ENST00000559886 RBMY1FQ15415 496 aaKnown RBP8.92□□□□□ -0.98
HERC1-205ENST00000559886 MORN3Q6PF18 240 aaPredicted RBP8.92□□□□□ -0.98
HERC1-205ENST00000559886 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
HERC1-205ENST00000559886 XCL2Q9UBD3 114 aa8.92□□□□□ -0.98
HERC1-205ENST00000559886 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 MUC21Q5SSG8 566 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 KCNIP4Q6PIL6 250 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 NEU1Q99519 415 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 C20orf144Q9BQM9 153 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 NAGKQ9UJ70 344 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 INSP01308 110 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 FOXA3P55318 350 aaPredicted RBP8.91□□□□□ -0.98
HERC1-205ENST00000559886 TCL1AP56279 114 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 TDRG1Q3Y452 100 aa8.91□□□□□ -0.98
HERC1-205ENST00000559886 HIGD1CA8MV81 97 aa8.9□□□□□ -0.98
HERC1-205ENST00000559886 CXCL1P09341 107 aa8.9□□□□□ -0.98
HERC1-205ENST00000559886 FAM159AQ6UWV7 190 aa8.9□□□□□ -0.98
HERC1-205ENST00000559886 NAT8BQ9UHF3 227 aa8.9□□□□□ -0.98
HERC1-205ENST00000559886 MGAM2Q2M2H8 2515 aa8.9□□□□□ -0.98
HERC1-205ENST00000559886 NUP35Q8NFH5 326 aa8.9□□□□□ -0.99
HERC1-205ENST00000559886 KCNS1Q96KK3 526 aa8.9□□□□□ -0.99
HERC1-205ENST00000559886 C1QTNF4Q9BXJ3 329 aa8.9□□□□□ -0.99
HERC1-205ENST00000559886 CSTL1Q9H114 145 aa8.9□□□□□ -0.99
HERC1-205ENST00000559886 NOTCH1P46531 2555 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 TRBV24-1A0A075B6N3 115 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 TRAV9-1A0A075B6T8 112 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 LOC102724200A0A096LPH7 203 aaPredicted RBP8.89□□□□□ -0.99
HERC1-205ENST00000559886 A0A1W2PPQ1 181 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 GRIFINA4D1Z8 144 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 COLCA2A8K830 154 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 IGLC6P0CF74 106 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 IGHV4-30-4P0DP06 118 aa8.89□□□□□ -0.99
HERC1-205ENST00000559886 NBEAL1Q6ZS30 2694 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 TGIF2-C20orf24A0A0A6YYL0 155 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 KIR2DL5BA0A0G2JN68 375 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 KIR2DL5BA0A0G2JPC4 375 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 DNLZQ5SXM8 178 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 KIR2DL5AQ8N109 375 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 C1orf158Q8N1D5 194 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 TMEM256Q8N2U0 113 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 KIR2DL5BQ8NHK3 375 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 GNRH2O43555 120 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 TYMSP04818 313 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 KPRPQ5T749 579 aaPredicted RBP8.88□□□□□ -0.99
HERC1-205ENST00000559886 FER1L6-AS1Q8NA97 138 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 PGLYRP4Q96LB8 373 aa8.88□□□□□ -0.99
HERC1-205ENST00000559886 A8MZ25 164 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 LINC01587Q99440 93 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 CTRLP40313 264 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 ASIPP42127 132 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 LYZL1Q6UWQ5 148 aa8.87□□□□□ -0.99
HERC1-205ENST00000559886 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
HERC1-205ENST00000559886 SPINK4O60575 86 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 APOC4P55056 127 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 FAM210BQ96KR6 192 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 TMEM208Q9BTX3 173 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 TPPP3Q9BW30 176 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 F2Z2F3 143 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 MED14OSP0DP75 135 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
HERC1-205ENST00000559886 GOLT1BQ9Y3E0 138 aa8.86□□□□□ -0.99
HERC1-205ENST00000559886 MUC4Q99102 2169 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 CBY3A6NI87 242 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 H3BVH4 76 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 SNAI2O43623 268 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 ARMS2P0C7Q2 107 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 S100A4P26447 101 aaKnown RBP8.85□□□□□ -0.99
HERC1-205ENST00000559886 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
HERC1-205ENST00000559886 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.85□□□□□ -0.99
HERC1-205ENST00000559886 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 TRGV11A0A075B6L2 103 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 A0A1B0GUT8 65 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 HTN1P15515 57 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 MRPL54Q6P161 138 aaKnown RBP8.85□□□□□ -0.99
HERC1-205ENST00000559886 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 SCRT2Q9NQ03 307 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
HERC1-205ENST00000559886 IGHV3OR16-12A0A075B7B8 117 aa8.84□□□□□ -0.99
HERC1-205ENST00000559886 PRM2P04554 102 aa8.84□□□□□ -0.99
HERC1-205ENST00000559886 RAB5AP20339 215 aa8.84□□□□□ -0.99
HERC1-205ENST00000559886 A0A1B0GXF2 115 aa8.83□□□□□ -1
HERC1-205ENST00000559886 UBE2CO00762 179 aa8.83□□□□□ -1
HERC1-205ENST00000559886 FRMD6-AS1P0C7T7 363 aa8.83□□□□□ -1
HERC1-205ENST00000559886 WDR73Q6P4I2 378 aa8.83□□□□□ -1
HERC1-205ENST00000559886 BORCS7Q96B45 105 aa8.83□□□□□ -1
HERC1-205ENST00000559886 DNHD1Q96M86 4753 aa8.83□□□□□ -1
HERC1-205ENST00000559886 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
HERC1-205ENST00000559886 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
HERC1-205ENST00000559886 RASL11AQ6T310 242 aa8.83□□□□□ -1
HERC1-205ENST00000559886 OR10AG1Q8NH19 301 aa8.83□□□□□ -1
HERC1-205ENST00000559886 C9orf85Q96MD7 179 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms