RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 ICOSQ9Y6W8 199 aa7.47□□□□□ -1.21
HERC1-204ENST00000559715 IGKV2-40A0A087WW87 121 aaPredicted RBP7.46□□□□□ -1.22
HERC1-204ENST00000559715 LRCOL1A6NCL2 159 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 IGKV2D-40P01614 121 aaPredicted RBP7.46□□□□□ -1.22
HERC1-204ENST00000559715 ERVFC1-1P60608 527 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 RAB2AP61019 212 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 LGALSLQ3ZCW2 172 aaPredicted RBP7.46□□□□□ -1.22
HERC1-204ENST00000559715 ZFP69Q49AA0 526 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 PQLC2Q6ZP29 291 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 TMUB2Q71RG4 321 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 IQCF2Q8IXL9 164 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 OR10G4Q8NGN3 311 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 OR10G9Q8NGN4 311 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 OR10G7Q8NGN6 311 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 PRELID1Q9Y255 219 aa7.46□□□□□ -1.22
HERC1-204ENST00000559715 IGHV1OR15-1A0A075B7D0 117 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 K7EQD1 137 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 PFDN1O60925 122 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 GPX1P07203 203 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 SEC11BP0C7V7 166 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 CDC34P49427 236 aaPredicted RBP7.45□□□□□ -1.22
HERC1-204ENST00000559715 HAMPP81172 84 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 ICAM4Q14773 271 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 NEGR1Q7Z3B1 354 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 C9orf62Q8N4C0 152 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 FXYD5Q96DB9 178 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 PAXXQ9BUH6 204 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 ZNF471Q9BX82 626 aaPredicted RBP7.45□□□□□ -1.22
HERC1-204ENST00000559715 OR51M1Q9H341 326 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
HERC1-204ENST00000559715 PKHD1L1Q86WI1 4243 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 A0A1W2PPV4 95 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 OR7C2O60412 319 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 SFTA3P0C7M3 94 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 STAG3L2P0CL84 134 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 TPT1P13693 172 aaKnown RBP7.44□□□□□ -1.22
HERC1-204ENST00000559715 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
HERC1-204ENST00000559715 AKR1C8PQ5T2L2 129 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 FAM122CQ6P4D5 195 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 NFE4Q86UQ8 179 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 RASL10AQ92737 203 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 MSRB1Q9NZV6 116 aa7.44□□□□□ -1.22
HERC1-204ENST00000559715 TRBV7-9A0A0J9YWB2 115 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 UMAD1C9J7I0 102 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 NBEAP1P0C6P0 100 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 GCSHP23434 173 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 UBE2L3P68036 154 aaKnown RBP7.43□□□□□ -1.22
HERC1-204ENST00000559715 SLAQ13239 276 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 SLC51BQ86UW2 128 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 Q8TAT8 98 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 SUN5Q8TC36 379 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 BLNKQ8WV28 456 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 FRZBQ92765 325 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 RAB24Q969Q5 203 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
HERC1-204ENST00000559715 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 LY96Q9Y6Y9 160 aa7.43□□□□□ -1.22
HERC1-204ENST00000559715 CTXND1A0A1B0GTU2 59 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 K7EP13 123 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 RGS13O14921 159 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 EREGO14944 169 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 ZNF138P52744 262 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 ZNF726P1Q15940 193 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 EIF5AL1Q6IS14 154 aaKnown RBP7.42□□□□□ -1.22
HERC1-204ENST00000559715 DPPA3Q6W0C5 159 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 PHYHIPLQ96FC7 376 aa7.42□□□□□ -1.22
HERC1-204ENST00000559715 LOC100131303A0A0U1RQF7 123 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 CXorf1O96002 111 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 OR10J4P0C629 311 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 ARL14EPLP0DKL9 152 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 GYPEP15421 78 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 MUC21Q5SSG8 566 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 Q6AWC8 147 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 ARL6IP6Q8N6S5 226 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 AAMDCQ9H7C9 122 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 TMEM167BQ9NRX6 74 aa7.41□□□□□ -1.22
HERC1-204ENST00000559715 TRAV9-2A0A087WT02 112 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 GCHFRP30047 84 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 RAB5CP51148 216 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 TDRG1Q3Y452 100 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 TMED6Q8WW62 240 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 TMEM70Q9BUB7 260 aa7.4□□□□□ -1.22
HERC1-204ENST00000559715 RBAKDNA6NC62 111 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 HMGB3O15347 200 aaKnown RBP7.39□□□□□ -1.23
HERC1-204ENST00000559715 EIF3GO75821 320 aaKnown RBP eCLIP7.39□□□□□ -1.23
HERC1-204ENST00000559715 CRYGDP07320 174 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 SRIP30626 198 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 TIRAPP58753 221 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 MBD3L1Q8WWY6 194 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 TVP23CQ96ET8 276 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 OTORQ9NRC9 128 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 ARL2-SNX15V9GYD0 113 aa7.39□□□□□ -1.23
HERC1-204ENST00000559715 TRGV4A0A0C4DH28 118 aa7.38□□□□□ -1.23
HERC1-204ENST00000559715 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms