RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CSTL1Q9H114 145 aa8.33□□□□□ -1.08
CARMIL3-202ENST00000559694 CHAC1Q9BUX1 264 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 A6NDX4 124 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 ODF3BA8MYP8 253 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 IGHG2P01859 326 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 PRR20EP86478 221 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 PRR20CP86479 221 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 PRR20DP86480 221 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 PRR20BP86481 221 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 PRR20AP86496 221 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 FOXE3Q13461 319 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 RNF182Q8N6D2 247 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 TRAV12-3A0A0B4J271 114 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 LGALS1P09382 135 aaKnown RBP8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 KIR2DL4Q99706 377 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
CARMIL3-202ENST00000559694 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 VCX2Q9H322 139 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 SMPXQ9UHP9 88 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 SSBP2P81877 361 aaPredicted RBP8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 Q86TA4 180 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 ZNF815PA8K554 130 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 SLURP1P55000 103 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 SMR3AQ99954 134 aa8.31□□□□□ -1.08
CARMIL3-202ENST00000559694 CLPSL1A2RUU4 121 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 NPIPB6E9PJ23 425 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 K7EIM0 57 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 SRSF1Q07955 248 aaKnown RBP eCLIP8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 CT83Q5H943 113 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 A8MWV9 139 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 LINC00477Q96M19 166 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 A0A1W2PPM0 123 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 LYPD1Q8N2G4 141 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 XCL2Q9UBD3 114 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 ERCC8Q13216 396 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 ZNF492Q9P255 531 aa8.3□□□□□ -1.08
CARMIL3-202ENST00000559694 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 TMEM213A2RRL7 107 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 AZU1P20160 251 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 SRSF2Q01130 221 aaKnown RBP8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 IGHV7-4-1A0A0J9YVY3 117 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 TMEM262E9PQX1 116 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 Q6YL49 198 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 ZC2HC1AQ96GY0 325 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 TEX22C9J3V5 150 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 IGKV1-17P01599 117 aa8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 KLF5Q13887 457 aaPredicted RBP8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 CITED2Q99967 270 aaPredicted RBP8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
CARMIL3-202ENST00000559694 AVPP01185 164 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 PDE6HQ13956 83 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 WIPF2Q8TF74 440 aaPredicted RBP8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 C1QTNF4Q9BXJ3 329 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 I3L2K1 104 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 SH2D1AO60880 128 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 CD300EQ496F6 205 aaPredicted RBP8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 TMEM86BQ8N661 226 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 THAP8Q8NA92 274 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 CFHR4Q92496 578 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 PGPEP1Q9NXJ5 209 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 TNFRSF18Q9Y5U5 241 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 GAGE12HA6NDE8 117 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 CTSGP08311 255 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 BRWD1-AS2P59051 145 aa8.28□□□□□ -1.08
CARMIL3-202ENST00000559694 TRBV19A0A075B6N1 114 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 GAGE2BQ13066 116 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 SPINK13Q1W4C9 94 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 GAGE2EQ4V326 116 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 ZFAND6Q6FIF0 208 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 DLX4Q92988 240 aaPredicted RBP8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.08
CARMIL3-202ENST00000559694 DSPP15924 2871 aaKnown RBP8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 UBE2L6O14933 153 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 LAGE3Q14657 143 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 PSMG3-AS1Q96PY0 264 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 ZNF747Q9BV97 191 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 TRGV4A0A0C4DH28 118 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 H7C1H1 209 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 LGALS9BQ3B8N2 356 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 LGALS9CQ6DKI2 356 aa8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
CARMIL3-202ENST00000559694 TRGV11A0A075B6L2 103 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 A0A087WW49 117 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 H3BRN7 92 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 TSPAN13O95857 204 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 FAM104BQ5XKR9 115 aa8.26□□□□□ -1.09
CARMIL3-202ENST00000559694 ATP6V0BQ99437 205 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms