RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 KCNIP2Q9NS61 270 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 NAGKQ9UJ70 344 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 IGHV1OR15-1A0A075B7D0 117 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 KLLNB2CW77 178 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 ZNF138P52744 262 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 TCL1AP56279 114 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 DAZ2Q13117 558 aaKnown RBP5.05□□□□□ -1.6
SPG11-213ENST00000558988 TMEM183BQ1AE95 376 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 TTC32Q5I0X7 151 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 SPATA12Q7Z6I5 190 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 TMEM183AQ8IXX5 376 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 ZFAND2AQ8N6M9 145 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 PPP1R1CQ8WVI7 109 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 FXYD5Q96DB9 178 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 ATP5SQ99766 215 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 NMES1Q9C002 83 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 WDR61Q9GZS3 305 aaKnown RBP5.05□□□□□ -1.6
SPG11-213ENST00000558988 Q9H3A6 140 aa5.05□□□□□ -1.6
SPG11-213ENST00000558988 TRGV4A0A0C4DH28 118 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 HMGB3O15347 200 aaKnown RBP5.04□□□□□ -1.6
SPG11-213ENST00000558988 PRAF2O60831 178 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 ZNF324O75467 553 aaPredicted RBP5.04□□□□□ -1.6
SPG11-213ENST00000558988 IFNA5P01569 189 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 SFTA3P0C7M3 94 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 FUSP35637 526 aaKnown RBP eCLIP5.04□□□□□ -1.6
SPG11-213ENST00000558988 H2BFSP57053 126 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 CYCSP99999 105 aaKnown RBP5.04□□□□□ -1.6
SPG11-213ENST00000558988 IFITM3Q01628 133 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 ZNF415Q09FC8 603 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 C9orf47Q6ZRZ4 202 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 VSIG2Q96IQ7 327 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 FAM19A4Q96LR4 140 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 MRPL32Q9BYC8 188 aaKnown RBP5.04□□□□□ -1.6
SPG11-213ENST00000558988 ZNF492Q9P255 531 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 MBD2Q9UBB5 411 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 MRPS16Q9Y3D3 137 aaKnown RBP5.04□□□□□ -1.6
SPG11-213ENST00000558988 HSPB11Q9Y547 144 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 ICOSQ9Y6W8 199 aa5.04□□□□□ -1.6
SPG11-213ENST00000558988 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 F6UZH7 168 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 SPINK4O60575 86 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 NXPH4O95158 308 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 PET100P0DJ07 73 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 CRISP2P16562 243 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 TIRAPP58753 221 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 LINC00315P59091 139 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 DEFA1P59665 94 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 DEFA3P59666 94 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 ANXA2RQ3ZCQ2 193 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 KHDC3LQ587J8 217 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 MAPKAPK5-AS1Q8N8E1 139 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 CMTM2Q8TAZ6 248 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 DAZAP1Q96EP5 407 aaKnown RBP5.03□□□□□ -1.6
SPG11-213ENST00000558988 ST6GAL2Q96JF0 529 aa5.03□□□□□ -1.6
SPG11-213ENST00000558988 A0A1W2PPV4 95 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 PGPA6NDG6 321 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 SIVA1O15304 175 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 MPC2O95563 127 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 RPL12P30050 165 aaKnown RBP5.02□□□□□ -1.61
SPG11-213ENST00000558988 TAS2R45P59539 299 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 RAB2AP61019 212 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 GNG5P63218 68 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 IBA57Q5T440 356 aaKnown RBP5.02□□□□□ -1.61
SPG11-213ENST00000558988 FAM159AQ6UWV7 190 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 PCNPQ8WW12 178 aaKnown RBP5.02□□□□□ -1.61
SPG11-213ENST00000558988 SGK494Q96LW2 274 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 PTTG2Q9NZH5 202 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 HHLA3Q9XRX5 114 aa5.02□□□□□ -1.61
SPG11-213ENST00000558988 TRAV8-1A0A0A6YYK1 113 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 IGHV3-16A0A0C4DH30 117 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 H3BNG1 76 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 NMBP08949 121 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 SRIP30626 198 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 CRYBA4P53673 196 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 ZNF266Q14584 549 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 ACOT6Q3I5F7 207 aaPredicted RBP5.01□□□□□ -1.61
SPG11-213ENST00000558988 LINC00299Q6ZSB3 139 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 IQCF2Q8IXL9 164 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 HSD17B11Q8NBQ5 300 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 ZNF479Q96JC4 524 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 LINC00467Q9BRT7 94 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 UPK3BQ9BT76 320 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 CTDSP1Q9GZU7 261 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 WFDC1Q9HC57 220 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 OTORQ9NRC9 128 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 PRO0255Q9UI72 69 aa5.01□□□□□ -1.61
SPG11-213ENST00000558988 A0A1W2PPQ1 181 aa5□□□□□ -1.61
SPG11-213ENST00000558988 RBAKDNA6NC62 111 aa5□□□□□ -1.61
SPG11-213ENST00000558988 C9JCJ5 164 aa5□□□□□ -1.61
SPG11-213ENST00000558988 GNRH2O43555 120 aa5□□□□□ -1.61
SPG11-213ENST00000558988 DNAH10OSP0CZ25 163 aa5□□□□□ -1.61
SPG11-213ENST00000558988 MRPL23Q16540 153 aaKnown RBP5□□□□□ -1.61
SPG11-213ENST00000558988 FAM74A1Q5RGS3 127 aa5□□□□□ -1.61
SPG11-213ENST00000558988 NEGR1Q7Z3B1 354 aa5□□□□□ -1.61
SPG11-213ENST00000558988 LYPD1Q8N2G4 141 aa5□□□□□ -1.61
SPG11-213ENST00000558988 NHLRC2Q8NBF2 726 aa5□□□□□ -1.61
SPG11-213ENST00000558988 OR10G4Q8NGN3 311 aa5□□□□□ -1.61
SPG11-213ENST00000558988 OR10G9Q8NGN4 311 aa5□□□□□ -1.61
SPG11-213ENST00000558988 OR10G7Q8NGN6 311 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms