RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 FAM236AA0A1B0GUQ0 79 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 FAM236BA0A1B0GV22 79 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 TMEM30CPA0ZSE6 113 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 A6NN06 94 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 NPFFO15130 113 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 TPST1O60507 370 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 IGLV3-1P01715 115 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 PDE6GP18545 87 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 POLR2JP52435 117 aaKnown RBP0.66□□□□□ -2.3
VPS13C-207ENST00000558919 RPS25P62851 125 aaKnown RBP0.66□□□□□ -2.3
VPS13C-207ENST00000558919 CSAG1Q6PB30 78 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 SLC25A26Q70HW3 274 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 SNX29P2Q8IUI4 249 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 ATOH7Q8N100 152 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 ATP6V0E2Q8NHE4 81 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 CASP8AP2Q9UKL3 1982 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 CPDO75976 1380 aa0.66□□□□□ -2.3
VPS13C-207ENST00000558919 ZCCHC6Q5VYS8 1495 aaKnown RBP0.66□□□□□ -2.3
VPS13C-207ENST00000558919 ERBINQ96RT1 1412 aa0.65□□□□□ -2.3
VPS13C-207ENST00000558919 NUP210LQ5VU65 1888 aa0.65□□□□□ -2.3
VPS13C-207ENST00000558919 TRBV20-1A0A075B6N2 111 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 TRAV2A0A0B4J234 112 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 TRAV17A0A0B4J275 112 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 A0A0G2JMM0 328 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 NUPR2A6NF83 97 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 ZNF670-ZNF695F2Z2N8 137 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 J3QLW9 94 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 M0R2P5 195 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 NDUFA2O43678 99 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IGF2P01344 180 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IGHV3-30P01768 117 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IGKCP01834 107 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IGHV3-30-5P0DP03 117 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 FXYD4P59646 89 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 RPL37AP61513 92 aaKnown RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 IQCJQ1A5X6 159 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 ATP11AUNQ6ZP68 121 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 DYNLRB2Q8TF09 96 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 PPDPFLQ8WWR9 84 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 ATG5Q9H1Y0 275 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 MRPL36Q9P0J6 103 aaKnown RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 ERG28Q9UKR5 140 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 NUP98P52948 1817 aa0.65□□□□□ -2.31
VPS13C-207ENST00000558919 CHD3Q12873 2000 aaKnown RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 HEATR1Q9H583 2144 aaKnown RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
VPS13C-207ENST00000558919 PRG4Q92954 1404 aaPredicted RBP0.64□□□□□ -2.31
VPS13C-207ENST00000558919 CACNA1AO00555 2505 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 M0R129 80 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 EFNA4P52798 201 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 RRAS2P62070 204 aaPredicted RBP0.64□□□□□ -2.31
VPS13C-207ENST00000558919 SCIMPQ6UWF3 145 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 LYPD5Q6UWN5 251 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 SBSPONQ8IVN8 264 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 DMAC1Q96GE9 116 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 PSMG3Q9BT73 122 aaPredicted RBP0.64□□□□□ -2.31
VPS13C-207ENST00000558919 TMEM191AQ9H0A3 160 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 SYNJ1O43426 1573 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 MGAMO43451 1857 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 EML5Q05BV3 1969 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 MYLKQ15746 1914 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 ALPK3Q96L96 1907 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 PTPRGP23470 1445 aa0.64□□□□□ -2.31
VPS13C-207ENST00000558919 MYO18AQ92614 2054 aaKnown RBP0.63□□□□□ -2.31
VPS13C-207ENST00000558919 UHRF1BP1LA0JNW5 1464 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 TRBV10-1A0A0K0K1A3 114 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 EFCAB10A6NFE3 127 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 HIGD1CA8MV81 97 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 FAM25AB3EWG3 89 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 FAM25CB3EWG5 89 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 FAM25GB3EWG6 89 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 CCDC179H3BU77 68 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 K7EP13 123 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 APOC1P02654 83 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 PYYP10082 97 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 PRB4P10163 310 aaPredicted RBP0.63□□□□□ -2.31
VPS13C-207ENST00000558919 GUCA1AP43080 201 aaPredicted RBP0.63□□□□□ -2.31
VPS13C-207ENST00000558919 SELENOWP63302 87 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 LINC00575Q6W349 94 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 Q6ZQY7 126 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 KCNRGQ8N5I3 272 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 ARL11Q969Q4 196 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 MRPL35Q9NZE8 188 aaKnown RBP0.63□□□□□ -2.31
VPS13C-207ENST00000558919 MYH3P11055 1940 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 PKD1L2Q7Z442 2459 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 CEP152O94986 1710 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 UNC79Q9P2D8 2635 aa0.63□□□□□ -2.31
VPS13C-207ENST00000558919 MYO5AQ9Y4I1 1855 aaKnown RBP0.63□□□□□ -2.31
VPS13C-207ENST00000558919 PTPRFP10586 1907 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 PEAK1Q9H792 1746 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 TRBV30A0A0K0K1B3 111 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 CCKP06307 115 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 LINC01545Q5VT33 79 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 MIC13Q5XKP0 118 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 XAF1Q6GPH4 301 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 RPL13AP3Q6NVV1 102 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 Q6ZUT4 128 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 Q86TA4 180 aa0.62□□□□□ -2.31
VPS13C-207ENST00000558919 VSTM2AQ8TAG5 236 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms