RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 IGKV3D-20A0A0C4DH25 116 aa10.27□□□□□ -0.77
TPM1-215ENST00000558868 SAP30O75446 220 aa10.27□□□□□ -0.77
TPM1-215ENST00000558868 ARMS2P0C7Q2 107 aa10.27□□□□□ -0.77
TPM1-215ENST00000558868 CD33P20138 364 aa10.27□□□□□ -0.77
TPM1-215ENST00000558868 PRR9Q5T870 116 aa10.27□□□□□ -0.77
TPM1-215ENST00000558868 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.27□□□□□ -0.77
TPM1-215ENST00000558868 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
TPM1-215ENST00000558868 C7orf71A4D174 169 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 GRIFINA4D1Z8 144 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 J3KRW8 73 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 CDKN1BP46527 198 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 KCNS1Q96KK3 526 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 MAP6D1Q9H9H5 199 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 C11orf21Q9P2W6 132 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
TPM1-215ENST00000558868 A8MTW9 85 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 MED14OSP0DP75 135 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 ASIPP42127 132 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 CACNG7P62955 275 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 Q0VG73 95 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 ZNF493Q6ZR52 646 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 CLUHP3Q96NS8 147 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 NAGKQ9UJ70 344 aa10.25□□□□□ -0.77
TPM1-215ENST00000558868 ZNF256Q9Y2P7 627 aaPredicted RBP10.25□□□□□ -0.77
TPM1-215ENST00000558868 H3BMM0 161 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 IGLV1-51P01701 117 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 OR5AL1P0C617 328 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 S100A2P29034 98 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 SLAQ13239 276 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 TWIST1Q15672 202 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 DNLZQ5SXM8 178 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 FAM159AQ6UWV7 190 aa10.24□□□□□ -0.77
TPM1-215ENST00000558868 KNCNA6PVL3 124 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 SNAI2O43623 268 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 IGKV3-20P01619 116 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
TPM1-215ENST00000558868 SRIP30626 198 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 ANXA2RQ3ZCQ2 193 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 AMTNQ6UX39 209 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 SMIM15Q7Z3B0 74 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 HIST3H2BBQ8N257 126 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 LINC00482Q8N8I6 264 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 CITED1Q99966 193 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 FAM110AQ9BQ89 295 aa10.23□□□□□ -0.77
TPM1-215ENST00000558868 SSBP4Q9BWG4 385 aaPredicted RBP10.23□□□□□ -0.77
TPM1-215ENST00000558868 LOC102724200A0A096LPH7 203 aaPredicted RBP10.22□□□□□ -0.77
TPM1-215ENST00000558868 AMBPP02760 352 aa10.22□□□□□ -0.77
TPM1-215ENST00000558868 NTF3P20783 257 aa10.22□□□□□ -0.77
TPM1-215ENST00000558868 INSL3P51460 131 aa10.22□□□□□ -0.77
TPM1-215ENST00000558868 AKR1D1P51857 326 aa10.22□□□□□ -0.77
TPM1-215ENST00000558868 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
TPM1-215ENST00000558868 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 TDRG1Q3Y452 100 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.77
TPM1-215ENST00000558868 TMEM191AQ9H0A3 160 aa10.21□□□□□ -0.77
TPM1-215ENST00000558868 M0R2Z0 102 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 ODF3L2Q3SX64 289 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 MUC21Q5SSG8 566 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 SPANXN1Q5VSR9 72 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 STHQ8IWL8 128 aa10.2□□□□□ -0.78
TPM1-215ENST00000558868 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 H3BVH4 76 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 ESDP10768 282 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 KIR3DS1Q14943 382 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 C9orf66Q5T8R8 295 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 Q6ZQT7 251 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 TMEM18Q96B42 140 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 C20orf144Q9BQM9 153 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 PHLDA3Q9Y5J5 127 aa10.19□□□□□ -0.78
TPM1-215ENST00000558868 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 TRAV12-2A0A075B6T6 113 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 MUC21A0A0G2JKD1 596 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 SSTP61278 116 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 NUTF2P61970 127 aaKnown RBP10.18□□□□□ -0.78
TPM1-215ENST00000558868 C18orf32Q8TCD1 76 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 MCRIP2Q9BUT9 160 aaKnown RBP10.18□□□□□ -0.78
TPM1-215ENST00000558868 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
TPM1-215ENST00000558868 GNRH2O43555 120 aa10.17□□□□□ -0.78
TPM1-215ENST00000558868 PPBPP02775 128 aa10.17□□□□□ -0.78
TPM1-215ENST00000558868 CD7P09564 240 aa10.17□□□□□ -0.78
TPM1-215ENST00000558868 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
TPM1-215ENST00000558868 OR10AG1Q8NH19 301 aa10.17□□□□□ -0.78
TPM1-215ENST00000558868 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
TPM1-215ENST00000558868 SERF1AO75920 110 aa10.16□□□□□ -0.78
TPM1-215ENST00000558868 INSP01308 110 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms