RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 Q6YL49 198 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 WFDC11Q8NEX6 87 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 OR8A1Q8NGG7 326 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 ZNF702PQ9H963 129 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 BRI3O95415 125 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 ZNF688P0C7X2 276 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 IGLC3P0DOY3 106 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 ZNF124Q15973 351 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 Q6ZN92 141 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 TMEM191AQ9H0A3 160 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 U3KQK5 164 aa7.97□□□□□ -1.13
TPM1-210ENST00000558264 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 A0A087WW49 117 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 M0R143 59 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 M0R381 172 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 FSHBP01225 129 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 SPANXN1Q5VSR9 72 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 MAP1LC3CQ9BXW4 147 aa7.96□□□□□ -1.13
TPM1-210ENST00000558264 FLNAP21333 2647 aaKnown RBP7.96□□□□□ -1.14
TPM1-210ENST00000558264 TRAV9-2A0A087WT02 112 aa7.96□□□□□ -1.14
TPM1-210ENST00000558264 GNRH2O43555 120 aa7.96□□□□□ -1.14
TPM1-210ENST00000558264 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.14
TPM1-210ENST00000558264 ANXA2RQ3ZCQ2 193 aa7.96□□□□□ -1.14
TPM1-210ENST00000558264 C2orf88Q9BSF0 95 aa7.96□□□□□ -1.14
TPM1-210ENST00000558264 OVOL1O14753 267 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 PSMG4Q5JS54 123 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 KHDC1LQ5JSQ8 128 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 C18orf15Q96N68 181 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 ZNF747Q9BV97 191 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 CNFNQ9BYD5 112 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 HSPB8Q9UJY1 196 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 ACANP16112 2415 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 S100A4P26447 101 aaKnown RBP7.95□□□□□ -1.14
TPM1-210ENST00000558264 DCANP1Q8TF63 244 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 LINC00477Q96M19 166 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 MS4A6AQ9H2W1 248 aa7.95□□□□□ -1.14
TPM1-210ENST00000558264 AGRNO00468 2067 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 HNRNPA3P51991 378 aaKnown RBP7.94□□□□□ -1.14
TPM1-210ENST00000558264 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 CRXO43186 299 aaPredicted RBP7.94□□□□□ -1.14
TPM1-210ENST00000558264 TCF21O43680 179 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 HOXD3P31249 432 aaPredicted RBP7.94□□□□□ -1.14
TPM1-210ENST00000558264 SLURP1P55000 103 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 ANKRD39Q53RE8 183 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 CYB5R2Q6BCY4 276 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 NF1P21359 2839 aa7.94□□□□□ -1.14
TPM1-210ENST00000558264 TRAV12-2A0A075B6T6 113 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 TRAV21A0A0B4J279 112 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 C20orf202A1L168 122 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 C21orf62-AS1Q17RA5 79 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 MAP1LC3AQ9H492 121 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
TPM1-210ENST00000558264 KLHDC1Q8N7A1 406 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 C11orf44Q8N8P7 122 aa7.93□□□□□ -1.14
TPM1-210ENST00000558264 TRAV12-3A0A0B4J271 114 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 K7EMT4 169 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 LGALS1P09382 135 aaKnown RBP7.92□□□□□ -1.14
TPM1-210ENST00000558264 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 DEFB104AQ8WTQ1 72 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 PPP1R14DQ9NXH3 145 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 CACNG7P62955 275 aa7.92□□□□□ -1.14
TPM1-210ENST00000558264 C14orf178Q8N769 122 aaPredicted RBP7.92□□□□□ -1.14
TPM1-210ENST00000558264 HELZ2Q9BYK8 2649 aaKnown RBP7.92□□□□□ -1.14
TPM1-210ENST00000558264 SNAI2O43623 268 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 HBDP02042 147 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 TSPOP30536 169 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 LEPP41159 167 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 ASIPP42127 132 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 HINT1P49773 126 aaPredicted RBP7.91□□□□□ -1.14
TPM1-210ENST00000558264 PET117Q6UWS5 81 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 SMIM15Q7Z3B0 74 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 LRRC75A-AS1Q8N1F1 130 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 OR2K2Q8NGT1 345 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 FAM19A4Q96LR4 140 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 ZNF580Q9UK33 172 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 PHLDA3Q9Y5J5 127 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 LENEPQ9Y5L5 61 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 TCAPO15273 167 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 MGPP08493 103 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 G0S2P27469 103 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 ID1P41134 155 aa7.91□□□□□ -1.14
TPM1-210ENST00000558264 NUTF2P61970 127 aaKnown RBP7.91□□□□□ -1.14
TPM1-210ENST00000558264 ELANEP08246 267 aa7.9□□□□□ -1.14
TPM1-210ENST00000558264 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
TPM1-210ENST00000558264 MTORP42345 2549 aa7.9□□□□□ -1.14
TPM1-210ENST00000558264 LBHQ53QV2 105 aaPredicted RBP7.9□□□□□ -1.15
TPM1-210ENST00000558264 ADAMTSL5Q6ZMM2 481 aa7.9□□□□□ -1.15
TPM1-210ENST00000558264 UBE2E2Q96LR5 201 aa7.9□□□□□ -1.15
TPM1-210ENST00000558264 JPT2Q9H910 190 aa7.9□□□□□ -1.15
TPM1-210ENST00000558264 HSBP1L1C9JCN9 74 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 PPBPP02775 128 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 RNASE3P12724 160 aaKnown RBP7.89□□□□□ -1.15
TPM1-210ENST00000558264 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 TCTEX1D4Q5JR98 221 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 NRACQ8N912 160 aa7.89□□□□□ -1.15
TPM1-210ENST00000558264 TMEM158Q8WZ71 300 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms