RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SCGB3A1Q96QR1 104 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 C20orf78Q9BR46 151 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 TAS2R4Q9NYW5 299 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 WDR90Q96KV7 1748 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 A0A1B0GUL6 1792 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 ADGRB3O60242 1522 aa1.56□□□□□ -2.16
SPG11-206ENST00000558093 NINQ8N4C6 2090 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 LAMC3Q9Y6N6 1575 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 MALRD1Q5VYJ5 2156 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 USP54Q70EL1 1684 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 HMCN1Q96RW7 5635 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 UBR1Q8IWV7 1749 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 LAMB4A4D0S4 1761 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 KDM3BQ7LBC6 1761 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 BTAF1O14981 1849 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 PDCD11Q14690 1871 aaKnown RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 hADV29S1A0JD25 119 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 A6NN06 94 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 C19orf84I3L1E1 186 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SLC25A20O43772 301 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SSSCA1O60232 199 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 HYPMO75409 117 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 LY6HO94772 140 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CFDP00746 253 aaPredicted RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 IGHV1-69P01742 117 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 GYPAP02724 150 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 IL5P05113 134 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 IGHV3-30-3P0DP02 117 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CCL4P13236 92 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CBLN1P23435 193 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CKS2P33552 79 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 ASIPP42127 132 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SUPT4H1P63272 117 aaKnown RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 ADIRFQ15847 76 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 C16orf47Q6ZP98 133 aaPredicted RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 OR2T35Q8NGX2 323 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 VSTM2AQ8TAG5 236 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 FAM213BQ8TBF2 198 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 AQP3Q92482 292 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 FGF13Q92913 245 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 POP5Q969H6 163 aaKnown RBP1.55□□□□□ -2.16
SPG11-206ENST00000558093 SPTSSAQ969W0 71 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 NABP2Q9BQ15 211 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 UPK3BQ9BT76 320 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CHCHD7Q9BUK0 85 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 ST20Q9HBF5 79 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 XAGE1AQ9HD64 81 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SPCS1Q9Y6A9 102 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 CASKIN1Q8WXD9 1431 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 MUC4Q99102 2169 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 ADGRL1O94910 1474 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 KIF14Q15058 1648 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 PREX2Q70Z35 1606 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 ABCA9Q8IUA7 1624 aa1.55□□□□□ -2.16
SPG11-206ENST00000558093 SHANK3Q9BYB0 1731 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 TRPM3Q9HCF6 1732 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 DIDO1Q9BTC0 2240 aaKnown RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 H3BRM9 83 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 M0R233 179 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 SDCBPO00560 298 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 CREBL2O60519 120 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 YPEL1O60688 119 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 SH2D1AO60880 128 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 PROSCO94903 275 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 IGKCP01834 107 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 IGLC2P0DOY2 106 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 IGLC3P0DOY3 106 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 PTHLHP12272 177 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 DEFA4P12838 97 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 PEBP1P30086 187 aaKnown RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 SSR2P43308 183 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 POLR2JP52435 117 aaKnown RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 MRPS36P82909 103 aaKnown RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 RBM3P98179 157 aaKnown RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 ZNF660Q6AZW8 331 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 DPPA3Q6W0C5 159 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 Q8N8P6 123 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 OR10AG1Q8NH19 301 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 PFN4Q8NHR9 129 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 CCL4L1Q8NHW4 92 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 TSKUQ8WUA8 353 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 IMMP2LQ96T52 175 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 AMELYQ99218 206 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 CST11Q9H112 138 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 TMEM242Q9NWH2 141 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 OR5V1Q9UGF6 321 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 ICOSQ9Y6W8 199 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 U3KQK5 164 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 ABCA8O94911 1581 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 COL24A1Q17RW2 1714 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 RGPD8O14715 1765 aaPredicted RBP1.54□□□□□ -2.16
SPG11-206ENST00000558093 RGPD2P0DJD1 1756 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 RGPD5Q99666 1765 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 CPAMD8Q8IZJ3 1885 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 MYO16Q9Y6X6 1858 aa1.54□□□□□ -2.16
SPG11-206ENST00000558093 DLG5Q8TDM6 1919 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms