RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 IGLV1-51P01701 117 aa9.27□□□□□ -0.93
SHMT2-233ENST00000557529 Q0VG73 95 aa9.27□□□□□ -0.93
SHMT2-233ENST00000557529 ZNF493Q6ZR52 646 aa9.27□□□□□ -0.93
SHMT2-233ENST00000557529 NAGKQ9UJ70 344 aa9.27□□□□□ -0.93
SHMT2-233ENST00000557529 KNCNA6PVL3 124 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 H3BMM0 161 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 IGKV3-20P01619 116 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 CACNG7P62955 275 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 KIAA1644Q3SXP7 199 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 LINC00482Q8N8I6 264 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 KCNS1Q96KK3 526 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
SHMT2-233ENST00000557529 SSBP4Q9BWG4 385 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-233ENST00000557529 SNAI2O43623 268 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 S100A2P29034 98 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 SRIP30626 198 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 ASIPP42127 132 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 KIR3DS1Q14943 382 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 OR10J3Q5JRS4 329 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 DNLZQ5SXM8 178 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 GFI1BQ5VTD9 330 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 Q6ZQT7 251 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 HIST3H2BBQ8N257 126 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 CITED1Q99966 193 aa9.25□□□□□ -0.93
SHMT2-233ENST00000557529 LOC102724200A0A096LPH7 203 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-233ENST00000557529 TRAV12-3A0A0B4J271 114 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 OR11H12B2RN74 326 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 NTF3P20783 257 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 S100A4P26447 101 aaKnown RBP9.24□□□□□ -0.93
SHMT2-233ENST00000557529 AKR1D1P51857 326 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 TWIST1Q15672 202 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 SPINK13Q1W4C9 94 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 ODF3L2Q3SX64 289 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 MUC21Q5SSG8 566 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 FAM110AQ9BQ89 295 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 IGHV4-4A0A075B6R2 117 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 M0R2Z0 102 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 ZNF324O75467 553 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-233ENST00000557529 TDRG1Q3Y452 100 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-233ENST00000557529 TMEM191AQ9H0A3 160 aa9.24□□□□□ -0.93
SHMT2-233ENST00000557529 MUC21A0A0G2JKD1 596 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 MUC21A0A140T8X8 626 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 H3BVH4 76 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 AMBPP02760 352 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 INSL3P51460 131 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 FAM104BQ5XKR9 115 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 SMIM15Q7Z3B0 74 aa9.23□□□□□ -0.93
SHMT2-233ENST00000557529 WNK1Q9H4A3 2382 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 TRAV12-2A0A075B6T6 113 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 CYSRT1A8MQ03 144 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 ESDP10768 282 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 SSTP61278 116 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 PDZD11Q5EBL8 140 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 SPANXN1Q5VSR9 72 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 SCRT2Q9NQ03 307 aa9.22□□□□□ -0.93
SHMT2-233ENST00000557529 IGHV1OR15-1A0A075B7D0 117 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1BA6NDE4 496 aaKnown RBP9.21□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1EA6NEQ0 496 aaKnown RBP9.21□□□□□ -0.94
SHMT2-233ENST00000557529 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 GNRH2O43555 120 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 RBMY1DP0C7P1 496 aaKnown RBP9.21□□□□□ -0.94
SHMT2-233ENST00000557529 ZNF124Q15973 351 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 C9orf66Q5T8R8 295 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 DMRTA1Q5VZB9 504 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 STHQ8IWL8 128 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 TMEM256Q8N2U0 113 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 C20orf144Q9BQM9 153 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.94
SHMT2-233ENST00000557529 TRGV11A0A075B6L2 103 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 SERF1AO75920 110 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 CD7P09564 240 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 MCRIP2Q9BUT9 160 aaKnown RBP9.2□□□□□ -0.94
SHMT2-233ENST00000557529 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 TIMM8BQ9Y5J9 83 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-233ENST00000557529 U3KQK5 164 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 SORL1Q92673 2214 aa9.2□□□□□ -0.94
SHMT2-233ENST00000557529 CRXO43186 299 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-233ENST00000557529 INSP01308 110 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 PPBPP02775 128 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 RNASE3P12724 160 aaKnown RBP9.19□□□□□ -0.94
SHMT2-233ENST00000557529 FABP4P15090 132 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 FXYD7P58549 80 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 NUTF2P61970 127 aaKnown RBP9.19□□□□□ -0.94
SHMT2-233ENST00000557529 PRR31Q5SQ13 230 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 TRPT1Q86TN4 253 aaKnown RBP9.19□□□□□ -0.94
SHMT2-233ENST00000557529 AMN1Q8IY45 258 aa9.19□□□□□ -0.94
SHMT2-233ENST00000557529 ORMDL3Q8N138 153 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms