RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 TRAV4A0A0B4J268 109 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 CTXND1A0A1B0GTU2 59 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 SUMO1P63165 101 aaKnown RBP12.11□□□□□ -0.47
NEDD1-212ENST00000557478 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 Q5BKY6 102 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 RPL7L1Q6DKI1 246 aaKnown RBP12.11□□□□□ -0.47
NEDD1-212ENST00000557478 NEGR1Q7Z3B1 354 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
NEDD1-212ENST00000557478 TRAV9-2A0A087WT02 112 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 C9JCJ5 164 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
NEDD1-212ENST00000557478 FHL2Q14192 279 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 TXNDC17Q9BRA2 123 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 SH3BGRL3Q9H299 93 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
NEDD1-212ENST00000557478 TRAV8-1A0A0A6YYK1 113 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 GNG5P63218 68 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
NEDD1-212ENST00000557478 Q6ZQT7 251 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 OR4C5Q8NGB2 326 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 STOML3Q8TAV4 291 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 PSG8Q9UQ74 426 aa12.09□□□□□ -0.47
NEDD1-212ENST00000557478 HERC2O95714 4834 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 F6UZH7 168 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 SIVA1O15304 175 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 EIF3GO75821 320 aaKnown RBP eCLIP12.08□□□□□ -0.48
NEDD1-212ENST00000557478 IFNA7P01567 189 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 SRIP30626 198 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 PTH2Q96A98 100 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 C8orf49Q96NF6 230 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 PKHD1P08F94 4074 aa12.08□□□□□ -0.48
NEDD1-212ENST00000557478 ZNF345Q14585 488 aa12.07□□□□□ -0.48
NEDD1-212ENST00000557478 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
NEDD1-212ENST00000557478 MUC4Q99102 2169 aa12.07□□□□□ -0.48
NEDD1-212ENST00000557478 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
NEDD1-212ENST00000557478 ARPC5O15511 151 aa12.06□□□□□ -0.48
NEDD1-212ENST00000557478 GNRH2O43555 120 aa12.06□□□□□ -0.48
NEDD1-212ENST00000557478 GCGP01275 180 aa12.06□□□□□ -0.48
NEDD1-212ENST00000557478 TYMSP04818 313 aa12.06□□□□□ -0.48
NEDD1-212ENST00000557478 EIF5AP63241 154 aaKnown RBP12.06□□□□□ -0.48
NEDD1-212ENST00000557478 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
NEDD1-212ENST00000557478 UMAD1C9J7I0 102 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 FHITP49789 147 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 LYPD5Q6UWN5 251 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 PRNTQ86SH4 94 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 NFE4Q86UQ8 179 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 ZNF479Q96JC4 524 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 ZFP30Q9Y2G7 519 aa12.05□□□□□ -0.48
NEDD1-212ENST00000557478 A0A0D9SG52 128 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 K7EQD1 137 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 NXPH4O95158 308 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 TIRAPP58753 221 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 ZNF876PQ49A33 203 aa12.04□□□□□ -0.48
NEDD1-212ENST00000557478 HMSDA8MTL9 139 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 PEX7O00628 323 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 SFTA3P0C7M3 94 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 GYPEP15421 78 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 TNP2Q05952 138 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 PRADC1Q9BSG0 188 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
NEDD1-212ENST00000557478 MAP1LC3B2A6NCE7 125 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 FAM74A7A6NL05 159 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 ZNF726P1Q15940 193 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 C10orf126Q8N4M7 172 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 SGK494Q96LW2 274 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 LY96Q9Y6Y9 160 aa12.02□□□□□ -0.49
NEDD1-212ENST00000557478 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 G3V3Q6 166 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 EVI2AP22794 236 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 S100A4P26447 101 aaKnown RBP12.01□□□□□ -0.49
NEDD1-212ENST00000557478 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 COX8CQ7Z4L0 72 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 CYTL1Q9NRR1 136 aa12.01□□□□□ -0.49
NEDD1-212ENST00000557478 PKD1P98161 4303 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 KANTRA0A1W2PQU2 76 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 C16orf90A8MZG2 172 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 EREGO14944 169 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 S100A9P06702 114 aaKnown RBP12□□□□□ -0.49
NEDD1-212ENST00000557478 MGST1P10620 155 aaKnown RBP12□□□□□ -0.49
NEDD1-212ENST00000557478 GATA1P15976 413 aaPredicted RBP12□□□□□ -0.49
NEDD1-212ENST00000557478 ZNF80P51504 273 aaPredicted RBP12□□□□□ -0.49
NEDD1-212ENST00000557478 UBE2G1P62253 170 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 RHOHQ15669 191 aa12□□□□□ -0.49
NEDD1-212ENST00000557478 TRBV6-1A0A0K0K1D8 114 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 A8MWV9 139 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 RS1O15537 224 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 ASIPP42127 132 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 UBE2G2P60604 165 aa11.99□□□□□ -0.49
NEDD1-212ENST00000557478 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms