RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 H2AFB1P0C5Y9 115 aa16.03■□□□□ 0.16
TDP1-216ENST00000556867 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
TDP1-216ENST00000556867 ZFP69Q49AA0 526 aa16.03■□□□□ 0.16
TDP1-216ENST00000556867 SMUG1Q53HV7 270 aa16.03■□□□□ 0.16
TDP1-216ENST00000556867 POM121L12Q8N7R1 296 aa16.03■□□□□ 0.16
TDP1-216ENST00000556867 GCGP01275 180 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 HOXA5P20719 270 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 RAB5CP51148 216 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 CST9LP1Q5W188 147 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 Q86TA4 180 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 SLC51BQ86UW2 128 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 KCNS1Q96KK3 526 aa16.02■□□□□ 0.16
TDP1-216ENST00000556867 MRPL16Q9NX20 251 aaKnown RBP16.02■□□□□ 0.16
TDP1-216ENST00000556867 PAGE4O60829 102 aa16.01■□□□□ 0.15
TDP1-216ENST00000556867 PFN1P07737 140 aaKnown RBP16.01■□□□□ 0.15
TDP1-216ENST00000556867 SPXQ9BT56 116 aa16.01■□□□□ 0.15
TDP1-216ENST00000556867 SDF2L1Q9HCN8 221 aa16.01■□□□□ 0.15
TDP1-216ENST00000556867 IGHV3-16A0A0C4DH30 117 aa16■□□□□ 0.15
TDP1-216ENST00000556867 A0A1B0GV50 99 aa16■□□□□ 0.15
TDP1-216ENST00000556867 OR5I1Q13606 314 aa16■□□□□ 0.15
TDP1-216ENST00000556867 C9orf62Q8N4C0 152 aa16■□□□□ 0.15
TDP1-216ENST00000556867 TRAV26-1A0A087WT03 109 aa15.99■□□□□ 0.15
TDP1-216ENST00000556867 GNRH2O43555 120 aa15.99■□□□□ 0.15
TDP1-216ENST00000556867 TYMSP04818 313 aa15.99■□□□□ 0.15
TDP1-216ENST00000556867 FMC1Q96HJ9 113 aa15.99■□□□□ 0.15
TDP1-216ENST00000556867 C11orf21Q9P2W6 132 aa15.99■□□□□ 0.15
TDP1-216ENST00000556867 TRAV1-1A0A0B4J248 108 aa15.98■□□□□ 0.15
TDP1-216ENST00000556867 SULT1A2P50226 295 aa15.98■□□□□ 0.15
TDP1-216ENST00000556867 RNF212Q495C1 297 aa15.98■□□□□ 0.15
TDP1-216ENST00000556867 UBE2DNLQ8IWF7 75 aa15.98■□□□□ 0.15
TDP1-216ENST00000556867 TRBV6-1A0A0K0K1D8 114 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 H3BNG1 76 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 NUDT3O95989 172 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 RASL10AQ92737 203 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 ZFP30Q9Y2G7 519 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 NACAE9PAV3 2078 aa15.97■□□□□ 0.15
TDP1-216ENST00000556867 A0A1B0GVG6 124 aa15.96■□□□□ 0.15
TDP1-216ENST00000556867 UBE2G1P62253 170 aa15.96■□□□□ 0.15
TDP1-216ENST00000556867 COX8CQ7Z4L0 72 aa15.96■□□□□ 0.15
TDP1-216ENST00000556867 AKR1C3P42330 323 aa15.95■□□□□ 0.14
TDP1-216ENST00000556867 A0A0J9YY99 117 aa15.94■□□□□ 0.14
TDP1-216ENST00000556867 M0R2P5 195 aa15.94■□□□□ 0.14
TDP1-216ENST00000556867 FAM3BP58499 235 aaPredicted RBP15.94■□□□□ 0.14
TDP1-216ENST00000556867 MANBALQ9NQG1 85 aa15.94■□□□□ 0.14
TDP1-216ENST00000556867 FABP5P3A8MUU1 101 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 LTAP01374 205 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 IGHV3-53P01767 116 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 CCL20P78556 96 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 ZC2HC1AQ96GY0 325 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 VSIG2Q96IQ7 327 aa15.93■□□□□ 0.14
TDP1-216ENST00000556867 SCO2A0A1W2PP80 73 aa15.92■□□□□ 0.14
TDP1-216ENST00000556867 TEX46H3BTG2 121 aa15.92■□□□□ 0.14
TDP1-216ENST00000556867 S100A9P06702 114 aaKnown RBP15.91■□□□□ 0.14
TDP1-216ENST00000556867 C9orf85Q96MD7 179 aa15.91■□□□□ 0.14
TDP1-216ENST00000556867 GNG13Q9P2W3 67 aa15.91■□□□□ 0.14
TDP1-216ENST00000556867 IGKV3D-20A0A0C4DH25 116 aa15.9■□□□□ 0.14
TDP1-216ENST00000556867 CRIP1P50238 77 aa15.9■□□□□ 0.14
TDP1-216ENST00000556867 SLAQ13239 276 aa15.9■□□□□ 0.14
TDP1-216ENST00000556867 FHL2Q14192 279 aa15.9■□□□□ 0.14
TDP1-216ENST00000556867 PRO0255Q9UI72 69 aa15.9■□□□□ 0.14
TDP1-216ENST00000556867 EPPK1P58107 5090 aaKnown RBP15.9■□□□□ 0.14
TDP1-216ENST00000556867 TRAV4A0A0B4J268 109 aa15.89■□□□□ 0.13
TDP1-216ENST00000556867 CCL18P55774 89 aa15.89■□□□□ 0.13
TDP1-216ENST00000556867 ZNF479Q96JC4 524 aa15.89■□□□□ 0.13
TDP1-216ENST00000556867 DNAH10Q8IVF4 4471 aa15.89■□□□□ 0.13
TDP1-216ENST00000556867 SH2D1AO60880 128 aa15.88■□□□□ 0.13
TDP1-216ENST00000556867 SFTA3P0C7M3 94 aa15.88■□□□□ 0.13
TDP1-216ENST00000556867 RNASE3P12724 160 aaKnown RBP15.88■□□□□ 0.13
TDP1-216ENST00000556867 FAM162BQ5T6X4 162 aa15.88■□□□□ 0.13
TDP1-216ENST00000556867 TXNDC17Q9BRA2 123 aa15.88■□□□□ 0.13
TDP1-216ENST00000556867 PAX4O43316 350 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 CRYBA4P53673 196 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 ZNF674Q2M3X9 581 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 C11orf52Q96A22 123 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 PTH2Q96A98 100 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 HHLA3Q9XRX5 114 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 LINC00588Q9Y4M8 146 aa15.87■□□□□ 0.13
TDP1-216ENST00000556867 A0A096LPF7 62 aa15.86■□□□□ 0.13
TDP1-216ENST00000556867 TRGV4A0A0C4DH28 118 aa15.86■□□□□ 0.13
TDP1-216ENST00000556867 ZNF876PQ49A33 203 aa15.86■□□□□ 0.13
TDP1-216ENST00000556867 OR4C5Q8NGB2 326 aa15.86■□□□□ 0.13
TDP1-216ENST00000556867 FRAS1Q86XX4 4008 aa15.85■□□□□ 0.13
TDP1-216ENST00000556867 B4DEV8 164 aa15.85■□□□□ 0.13
TDP1-216ENST00000556867 ORM1P02763 201 aa15.85■□□□□ 0.13
TDP1-216ENST00000556867 ASIPP42127 132 aa15.85■□□□□ 0.13
TDP1-216ENST00000556867 ZNRF2Q8NHG8 242 aa15.85■□□□□ 0.13
TDP1-216ENST00000556867 IGLV2-18A0A075B6J9 118 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 KRBOX1C9JBD0 128 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 C9JCJ5 164 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 IFNA1P01562 189 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 S100A4P26447 101 aaKnown RBP15.84■□□□□ 0.13
TDP1-216ENST00000556867 NKX2-5P52952 324 aaPredicted RBP15.84■□□□□ 0.13
TDP1-216ENST00000556867 DNLZQ5SXM8 178 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 Q6ZR54 194 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 NHLRC2Q8NBF2 726 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 MLST8Q9BVC4 326 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 ICOSQ9Y6W8 199 aa15.84■□□□□ 0.13
TDP1-216ENST00000556867 LINC01559Q495D7 138 aa15.83■□□□□ 0.12
TDP1-216ENST00000556867 ALKAL2Q6UX46 152 aa15.83■□□□□ 0.12
TDP1-216ENST00000556867 BAGE2Q86Y30 109 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms