RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 A0A0D9SG52 128 aa15.72■□□□□ 0.11
PABPN1-207ENST00000556821 K7EQM0 130 aa15.72■□□□□ 0.11
PABPN1-207ENST00000556821 FHITP49789 147 aa15.72■□□□□ 0.11
PABPN1-207ENST00000556821 ZNRF2Q8NHG8 242 aa15.72■□□□□ 0.11
PABPN1-207ENST00000556821 NDFIP1Q9BT67 221 aa15.72■□□□□ 0.11
PABPN1-207ENST00000556821 FAM74A7A6NL05 159 aa15.71■□□□□ 0.11
PABPN1-207ENST00000556821 BCL2L11O43521 198 aa15.71■□□□□ 0.11
PABPN1-207ENST00000556821 GNRH2O43555 120 aa15.71■□□□□ 0.11
PABPN1-207ENST00000556821 TYMSP04818 313 aa15.71■□□□□ 0.11
PABPN1-207ENST00000556821 C11orf21Q9P2W6 132 aa15.71■□□□□ 0.11
PABPN1-207ENST00000556821 IGHV3-16A0A0C4DH30 117 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 RTL8CO15255 209 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 IGHV3-53P01767 116 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 SEC11BP0C7V7 166 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 CCL18P55774 89 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 PRNTQ86SH4 94 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 LINC00479Q96M42 142 aa15.7■□□□□ 0.1
PABPN1-207ENST00000556821 ZNF471Q9BX82 626 aaPredicted RBP15.7■□□□□ 0.1
PABPN1-207ENST00000556821 RASL10AQ92737 203 aa15.69■□□□□ 0.1
PABPN1-207ENST00000556821 SPXQ9BT56 116 aa15.69■□□□□ 0.1
PABPN1-207ENST00000556821 TRAV34A0A0B4J273 112 aa15.68■□□□□ 0.1
PABPN1-207ENST00000556821 KANTRA0A1W2PQU2 76 aa15.68■□□□□ 0.1
PABPN1-207ENST00000556821 FBLL1A6NHQ2 334 aaKnown RBP15.68■□□□□ 0.1
PABPN1-207ENST00000556821 GCGP01275 180 aa15.68■□□□□ 0.1
PABPN1-207ENST00000556821 A0A096LPF7 62 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 PEX7O00628 323 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 IFNA7P01567 189 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 FHL2Q14192 279 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 KCNS1Q96KK3 526 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 SDF2L1Q9HCN8 221 aa15.67■□□□□ 0.1
PABPN1-207ENST00000556821 HSPG2P98160 4391 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 PFN1P07737 140 aaKnown RBP15.66■□□□□ 0.1
PABPN1-207ENST00000556821 ESRGQ1W209 222 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 SMUG1Q53HV7 270 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 TMUB2Q71RG4 321 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 NKX6-2Q9C056 277 aaPredicted RBP15.66■□□□□ 0.1
PABPN1-207ENST00000556821 ARL2-SNX15V9GYD0 113 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 PKD1P98161 4303 aa15.66■□□□□ 0.1
PABPN1-207ENST00000556821 SFTA3P0C7M3 94 aa15.65■□□□□ 0.1
PABPN1-207ENST00000556821 SAPCD1Q5SSQ6 148 aa15.65■□□□□ 0.1
PABPN1-207ENST00000556821 Q6ZNX1 250 aa15.65■□□□□ 0.1
PABPN1-207ENST00000556821 Q86TA4 180 aa15.65■□□□□ 0.1
PABPN1-207ENST00000556821 ZNF479Q96JC4 524 aa15.65■□□□□ 0.1
PABPN1-207ENST00000556821 UMAD1C9J7I0 102 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 M0R2P5 195 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 CRYBA4P53673 196 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 ZFP69Q49AA0 526 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 STOML3Q8TAV4 291 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 FAM213BQ8TBF2 198 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 MBD3L1Q8WWY6 194 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 HIST1H2BAQ96A08 127 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 PRO0255Q9UI72 69 aa15.64■□□□□ 0.09
PABPN1-207ENST00000556821 NBDYA0A0U1RRE5 68 aa15.63■□□□□ 0.09
PABPN1-207ENST00000556821 PAX4O43316 350 aa15.63■□□□□ 0.09
PABPN1-207ENST00000556821 TCTE3Q8IZS6 198 aa15.63■□□□□ 0.09
PABPN1-207ENST00000556821 PFDN1O60925 122 aa15.62■□□□□ 0.09
PABPN1-207ENST00000556821 PPT1P50897 306 aa15.62■□□□□ 0.09
PABPN1-207ENST00000556821 SFT2D1Q8WV19 159 aa15.62■□□□□ 0.09
PABPN1-207ENST00000556821 UPK3BQ9BT76 320 aa15.62■□□□□ 0.09
PABPN1-207ENST00000556821 HHLA3Q9XRX5 114 aa15.62■□□□□ 0.09
PABPN1-207ENST00000556821 EIF5AP63241 154 aaKnown RBP15.61■□□□□ 0.09
PABPN1-207ENST00000556821 LGALSLQ3ZCW2 172 aaPredicted RBP15.61■□□□□ 0.09
PABPN1-207ENST00000556821 C9orf85Q96MD7 179 aa15.61■□□□□ 0.09
PABPN1-207ENST00000556821 MRPS16Q9Y3D3 137 aaKnown RBP15.61■□□□□ 0.09
PABPN1-207ENST00000556821 HERC1Q15751 4861 aa15.61■□□□□ 0.09
PABPN1-207ENST00000556821 TRAV4A0A0B4J268 109 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 TRGV4A0A0C4DH28 118 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 A0A1B0GV50 99 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 PRSS29PA6NIE9 313 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 PAGE4O60829 102 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 TPT1P13693 172 aaKnown RBP15.6■□□□□ 0.09
PABPN1-207ENST00000556821 SLAQ13239 276 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 CST9LP1Q5W188 147 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 DPPA3Q6W0C5 159 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 ICOSQ9Y6W8 199 aa15.6■□□□□ 0.09
PABPN1-207ENST00000556821 IGKV3D-20A0A0C4DH25 116 aa15.59■□□□□ 0.09
PABPN1-207ENST00000556821 RNASE3P12724 160 aaKnown RBP15.59■□□□□ 0.09
PABPN1-207ENST00000556821 C1orf134Q5TEV5 83 aa15.59■□□□□ 0.09
PABPN1-207ENST00000556821 KRTAP1-5Q9BYS1 174 aa15.59■□□□□ 0.09
PABPN1-207ENST00000556821 Q9H8V8 135 aa15.59■□□□□ 0.09
PABPN1-207ENST00000556821 COX8CQ7Z4L0 72 aa15.58■□□□□ 0.08
PABPN1-207ENST00000556821 ZC2HC1AQ96GY0 325 aa15.58■□□□□ 0.08
PABPN1-207ENST00000556821 TCEAL7Q9BRU2 100 aa15.58■□□□□ 0.08
PABPN1-207ENST00000556821 H2AFB1P0C5Y9 115 aa15.57■□□□□ 0.08
PABPN1-207ENST00000556821 CRIP1P50238 77 aa15.57■□□□□ 0.08
PABPN1-207ENST00000556821 OR4C5Q8NGB2 326 aa15.57■□□□□ 0.08
PABPN1-207ENST00000556821 FMC1Q96HJ9 113 aa15.57■□□□□ 0.08
PABPN1-207ENST00000556821 TRBV6-1A0A0K0K1D8 114 aa15.56■□□□□ 0.08
PABPN1-207ENST00000556821 FABP5P3A8MUU1 101 aa15.56■□□□□ 0.08
PABPN1-207ENST00000556821 C9JCJ5 164 aa15.56■□□□□ 0.08
PABPN1-207ENST00000556821 ZNF876PQ49A33 203 aa15.56■□□□□ 0.08
PABPN1-207ENST00000556821 ZFP30Q9Y2G7 519 aa15.56■□□□□ 0.08
PABPN1-207ENST00000556821 LTAP01374 205 aa15.55■□□□□ 0.08
PABPN1-207ENST00000556821 C1QBP02746 253 aa15.55■□□□□ 0.08
PABPN1-207ENST00000556821 UBE2G1P62253 170 aa15.55■□□□□ 0.08
PABPN1-207ENST00000556821 MRPL23Q16540 153 aaKnown RBP15.55■□□□□ 0.08
PABPN1-207ENST00000556821 SOHLH1Q5JUK2 328 aa15.55■□□□□ 0.08
PABPN1-207ENST00000556821 PGPEP1LA6NFU8 196 aa15.54■□□□□ 0.08
PABPN1-207ENST00000556821 K7EQD1 137 aa15.54■□□□□ 0.08
PABPN1-207ENST00000556821 AKR1C3P42330 323 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms