RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 IGHV1OR15-1A0A075B7D0 117 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 TRAV34A0A0B4J273 112 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 PEX7O00628 323 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 PAGE4O60829 102 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
SRP54-210ENST00000556380 NKX2-5P52952 324 aaPredicted RBP6.82□□□□□ -1.32
SRP54-210ENST00000556380 LINC00310P59036 64 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 FLI1Q01543 452 aaPredicted RBP6.82□□□□□ -1.32
SRP54-210ENST00000556380 TDRG1Q3Y452 100 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 HIST1H2BAQ96A08 127 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 TREM1Q9NP99 234 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 GSN-AS1Q9NRJ2 163 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
SRP54-210ENST00000556380 A0A1B0GV50 99 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 CBY3A6NI87 242 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 F6UZH7 168 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 RGS13O14921 159 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 IFNA7P01567 189 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 DEFB130BP0DP73 79 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 DEFB130AP0DP74 79 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 ATP5G3P48201 142 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 TCTAP57738 103 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 DAD1P61803 113 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 COX8CQ7Z4L0 72 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 ZNF680Q8NEM1 530 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 C8orf49Q96NF6 230 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 TXNDC17Q9BRA2 123 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 C11orf21Q9P2W6 132 aa6.81□□□□□ -1.32
SRP54-210ENST00000556380 IGHV4-4A0A075B6R2 117 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 TRAV21A0A0B4J279 112 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 TRBV6-1A0A0K0K1D8 114 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 IGLL5B9A064 214 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 SPINK4O60575 86 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 TCL1AP56279 114 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 MUC21Q5SSG8 566 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 SAPCD1Q5SSQ6 148 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 IBA57Q5T440 356 aaKnown RBP6.8□□□□□ -1.32
SRP54-210ENST00000556380 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 PRNTQ86SH4 94 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 LINC00476Q8WZB0 136 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 FAM210BQ96KR6 192 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 NDFIP1Q9BT67 221 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 MANBALQ9NQG1 85 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 MDFICQ9P1T7 246 aa6.8□□□□□ -1.32
SRP54-210ENST00000556380 SNURFLB1AK76 121 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 GNRH2O43555 120 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 GCGP01275 180 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
SRP54-210ENST00000556380 TAGLN2P37802 199 aaKnown RBP6.79□□□□□ -1.32
SRP54-210ENST00000556380 CRIP1P50238 77 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 TMEM183BQ1AE95 376 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 SMUG1Q53HV7 270 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 Q6ZTI0 123 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 Q86TA4 180 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 C18orf15Q96N68 181 aa6.79□□□□□ -1.32
SRP54-210ENST00000556380 IGHV3-16A0A0C4DH30 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 GAGE12BA1L429 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 GAGE7O76087 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
SRP54-210ENST00000556380 GAGE12FP0CL80 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 GAGE12GP0CL81 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 GAGE12IP0CL82 117 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 LGALS9CQ6DKI2 356 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 FAM159AQ6UWV7 190 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 ZNF575Q86XF7 245 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 FMC1Q96HJ9 113 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 GNG13Q9P2W3 67 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 ZFP30Q9Y2G7 519 aa6.78□□□□□ -1.32
SRP54-210ENST00000556380 DNAH2Q9P225 4427 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 MUC4Q99102 2169 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 TRGV11A0A075B6L2 103 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 LTAP01374 205 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 IFNA1P01562 189 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 TYMSP04818 313 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 ATP5G1P05496 136 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 HTN3P15516 51 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 TMEM88Q6PEY1 159 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 TMEM183AQ8IXX5 376 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 LYPD6BQ8NI32 183 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 C11orf52Q96A22 123 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 ZC2HC1AQ96GY0 325 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
SRP54-210ENST00000556380 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 IGKV3D-20A0A0C4DH25 116 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 FABP5P3A8MUU1 101 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 HOXA5P20719 270 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 AKR1C3P42330 323 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 RASL10AQ92737 203 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 KCNS1Q96KK3 526 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 SPXQ9BT56 116 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 NDUFAF3Q9BU61 184 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 NAGKQ9UJ70 344 aa6.76□□□□□ -1.33
SRP54-210ENST00000556380 F5H768 121 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 PDE6DO43924 150 aa6.75□□□□□ -1.33
SRP54-210ENST00000556380 NDUFS6O75380 124 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms