RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 PET100P0DJ07 73 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 RPL7P18124 248 aaKnown RBP3.98□□□□□ -1.77
PRKCH-220ENST00000556164 CXCL3P19876 107 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 HAMPP81172 84 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 SSBP1Q04837 148 aaKnown RBP3.98□□□□□ -1.77
PRKCH-220ENST00000556164 LINC00612Q8N6U2 182 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 RPUSD4Q96CM3 377 aaKnown RBP3.98□□□□□ -1.77
PRKCH-220ENST00000556164 ST6GAL2Q96JF0 529 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 HIGD1AQ9Y241 93 aa3.98□□□□□ -1.77
PRKCH-220ENST00000556164 A0A096LPF7 62 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 RGS5O15539 181 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 MED6O75586 246 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 NXPH4O95158 308 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 IL5P05113 134 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 PRSS2P07478 247 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 OR5G3P0C626 314 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 SRPXP78539 464 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 MRPS10P82664 201 aaKnown RBP3.97□□□□□ -1.77
PRKCH-220ENST00000556164 COX19Q49B96 90 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 CYP2G1PQ6ZSU1 146 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 Q6ZTI0 123 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 ACOT7LQ6ZUV0 252 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 TMED4Q7Z7H5 227 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 SMIM4Q8WVI0 70 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 C8orf49Q96NF6 230 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 SCGB3A2Q96PL1 93 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 CIB3Q96Q77 187 aaPredicted RBP3.97□□□□□ -1.77
PRKCH-220ENST00000556164 C20orf144Q9BQM9 153 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 SHANK2-AS3Q9BTD1 123 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 SCP2D1Q9UJQ7 156 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
PRKCH-220ENST00000556164 TRGV2A0A075B6R0 118 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 A0A087WTM6 91 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 TRAV12-3A0A0B4J271 114 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 A0A1B0GWB2 263 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 H3BP45 60 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 PPP1R2P9O14990 202 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 SYNGR2O43760 224 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 PITX3O75364 302 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 HYPMO75409 117 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 PRSS1P07477 247 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 LINC00869P0C866 280 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 NKX2-5P52952 324 aaPredicted RBP3.96□□□□□ -1.78
PRKCH-220ENST00000556164 TAL2Q16559 108 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 SPANXN5Q5MJ07 72 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 MRPL52Q86TS9 123 aaKnown RBP3.96□□□□□ -1.78
PRKCH-220ENST00000556164 NFE4Q86UQ8 179 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 OR10G7Q8NGN6 311 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 TMED6Q8WW62 240 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 VSIG2Q96IQ7 327 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 MIXL1Q9H2W2 232 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 ICOSQ9Y6W8 199 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 MYCBP2O75592 4640 aa3.96□□□□□ -1.78
PRKCH-220ENST00000556164 TRGV1A0A0A0MS02 117 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 PIGBOS1A0A0B4J2F0 54 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 DUXBA0A1W2PPF3 345 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 PMS2P5A8MQ11 134 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 PRAC2D3DTV9 90 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 PAX4O43316 350 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 SLC25A6P12236 298 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 CXCL2P19875 107 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 S100PP25815 95 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 DAZ2Q13117 558 aaKnown RBP3.95□□□□□ -1.78
PRKCH-220ENST00000556164 LCN15Q6UWW0 184 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 S100A7AQ86SG5 101 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 KRTAP19-1Q8IUB9 90 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 DIRAS2Q96HU8 199 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 C9orf85Q96MD7 179 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 SLC50A1Q9BRV3 221 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 ARL6Q9H0F7 186 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 ZNF331Q9NQX6 463 aaPredicted RBP3.95□□□□□ -1.78
PRKCH-220ENST00000556164 FUT9Q9Y231 359 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 FAT1Q14517 4588 aa3.95□□□□□ -1.78
PRKCH-220ENST00000556164 TRAV9-2A0A087WT02 112 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 A0A1B0GV72 72 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 K7EN84 100 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 K7EQD1 137 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 SLC17A3O00476 420 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 ZNF324O75467 553 aaPredicted RBP3.94□□□□□ -1.78
PRKCH-220ENST00000556164 OXTP01178 125 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 IGHV3-53P01767 116 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 ORM1P02763 201 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 RRAS2P62070 204 aaPredicted RBP3.94□□□□□ -1.78
PRKCH-220ENST00000556164 SELENOTP62341 195 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 ZFP82Q8N141 532 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 SEC22CQ9BRL7 303 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 LINC00467Q9BRT7 94 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 KRTAP3-1Q9BYR8 98 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 ARV1Q9H2C2 271 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 LY96Q9Y6Y9 160 aa3.94□□□□□ -1.78
PRKCH-220ENST00000556164 SCO2A0A1W2PP80 73 aa3.93□□□□□ -1.78
PRKCH-220ENST00000556164 A6NDN8 102 aa3.93□□□□□ -1.78
PRKCH-220ENST00000556164 NBEAP1P0C6P0 100 aa3.93□□□□□ -1.78
PRKCH-220ENST00000556164 CT45A10P0DMU9 189 aa3.93□□□□□ -1.78
PRKCH-220ENST00000556164 SLC38A11Q08AI6 406 aa3.93□□□□□ -1.78
PRKCH-220ENST00000556164 TWIST1Q15672 202 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms