RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-205ENST00000556096 A0A0J9YX75 114 aa11.01□□□□□ -0.65
VPS33B-205ENST00000556096 GPX1P07203 203 aa11.01□□□□□ -0.65
VPS33B-205ENST00000556096 C18orf32Q8TCD1 76 aa11.01□□□□□ -0.65
VPS33B-205ENST00000556096 CITED2Q99967 270 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-205ENST00000556096 CCL24O00175 119 aa11□□□□□ -0.65
VPS33B-205ENST00000556096 RNF114Q9Y508 228 aa11□□□□□ -0.65
VPS33B-205ENST00000556096 KLLNB2CW77 178 aa10.99□□□□□ -0.65
VPS33B-205ENST00000556096 PROK1P58294 105 aa10.99□□□□□ -0.65
VPS33B-205ENST00000556096 HIST2H2BDQ6DRA6 164 aa10.99□□□□□ -0.65
VPS33B-205ENST00000556096 EBLN2Q6P2I7 272 aa10.99□□□□□ -0.65
VPS33B-205ENST00000556096 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
VPS33B-205ENST00000556096 DUSP14O95147 198 aaKnown RBP10.98□□□□□ -0.65
VPS33B-205ENST00000556096 NTF3P20783 257 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 DEFB114Q30KQ6 69 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 PYY3Q5JQD4 70 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 MDFIQ99750 246 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 A0A1W2PRX2 142 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 OR5AL1P0C617 328 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 RNASE4P34096 147 aaKnown RBP10.98□□□□□ -0.65
VPS33B-205ENST00000556096 LEPP41159 167 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 Q6ZQT7 251 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 DYNLRB2Q8TF09 96 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 SIGLEC8Q9NYZ4 499 aa10.98□□□□□ -0.65
VPS33B-205ENST00000556096 J3KRW8 73 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 SNAI2O43623 268 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 TWIST1Q15672 202 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 FAM104BQ5XKR9 115 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 TMEM61Q8N0U2 210 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
VPS33B-205ENST00000556096 TRAV25A0A0B4J276 109 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 CD33P20138 364 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 IQCJQ1A5X6 159 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 KCNS1Q96KK3 526 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
VPS33B-205ENST00000556096 IGHV4-4A0A075B6R2 117 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-205ENST00000556096 PRR31Q5SQ13 230 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 MUC21Q5SSG8 566 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 TMEM158Q8WZ71 300 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 TSPOP30536 169 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 CACNG7P62955 275 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 SPAG8Q99932 426 aaPredicted RBP10.95□□□□□ -0.66
VPS33B-205ENST00000556096 U3KQK5 164 aa10.95□□□□□ -0.66
VPS33B-205ENST00000556096 A8MTW9 85 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 SSTP61278 116 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 ANXA2RQ3ZCQ2 193 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 SAMD10Q9BYL1 202 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 NIT2Q9NQR4 276 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
VPS33B-205ENST00000556096 C7orf71A4D174 169 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 ZNF324O75467 553 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-205ENST00000556096 ASIPP42127 132 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 CD300EQ496F6 205 aaPredicted RBP10.93□□□□□ -0.66
VPS33B-205ENST00000556096 NIT1Q86X76 327 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 AMN1Q8IY45 258 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 NAGKQ9UJ70 344 aa10.93□□□□□ -0.66
VPS33B-205ENST00000556096 OR4C46A6NHA9 309 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 CDKN1BP46527 198 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 DEFB131AP59861 70 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 MRPL51Q4U2R6 128 aaKnown RBP10.92□□□□□ -0.66
VPS33B-205ENST00000556096 AMTNQ6UX39 209 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 CHCHD1Q96BP2 118 aaKnown RBP10.92□□□□□ -0.66
VPS33B-205ENST00000556096 TENM1Q9UKZ4 2725 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 HLA-DRB4P13762 266 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 KRTAP10-3P60369 221 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 OR10AG1Q8NH19 301 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 URB1-AS1Q96HZ7 61 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 SCRT2Q9NQ03 307 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 ZNF256Q9Y2P7 627 aaPredicted RBP10.92□□□□□ -0.66
VPS33B-205ENST00000556096 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
VPS33B-205ENST00000556096 H3BVH4 76 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 RAB4AP20338 218 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
VPS33B-205ENST00000556096 AMTP48728 403 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 TDRG1Q3Y452 100 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 SPANXN1Q5VSR9 72 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 FAM159AQ6UWV7 190 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 RNF185Q96GF1 192 aa10.91□□□□□ -0.66
VPS33B-205ENST00000556096 D6R8Y8 96 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 H3BMM0 161 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 HSBP1O75506 76 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 PPBPP02775 128 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 LINC00614P0C842 121 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 RNASEKQ6P5S7 137 aaKnown RBP10.9□□□□□ -0.66
VPS33B-205ENST00000556096 SMIM15Q7Z3B0 74 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 NDUFA11Q86Y39 141 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.66
VPS33B-205ENST00000556096 TRAV12-3A0A0B4J271 114 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms