RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 IGLV2-11P01706 119 aa16.15■□□□□ 0.18
CDKN3-208ENST00000555837 UBE2DNLQ8IWF7 75 aa16.15■□□□□ 0.18
CDKN3-208ENST00000555837 TRBV6-1A0A0K0K1D8 114 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 FABP5P3A8MUU1 101 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 H3BNG1 76 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 PAGE4O60829 102 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 IFNA1P01562 189 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 AKR1C3P42330 323 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 OR5I1Q13606 314 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 RNF212Q495C1 297 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 Q6ZTI0 123 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 TVP23CQ96ET8 276 aa16.14■□□□□ 0.17
CDKN3-208ENST00000555837 TAGLN2P37802 199 aaKnown RBP16.13■□□□□ 0.17
CDKN3-208ENST00000555837 FAM3BP58499 235 aaPredicted RBP16.13■□□□□ 0.17
CDKN3-208ENST00000555837 POM121L12Q8N7R1 296 aa16.13■□□□□ 0.17
CDKN3-208ENST00000555837 DYNC2H1Q8NCM8 4307 aaKnown RBP16.13■□□□□ 0.17
CDKN3-208ENST00000555837 Q86TA4 180 aa16.11■□□□□ 0.17
CDKN3-208ENST00000555837 C9orf62Q8N4C0 152 aa16.11■□□□□ 0.17
CDKN3-208ENST00000555837 TRAV34A0A0B4J273 112 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 A0A1B0GV50 99 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 M0R2P5 195 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 RASL10AQ92737 203 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 C8orf49Q96NF6 230 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 LYSTQ99698 3801 aa16.1■□□□□ 0.17
CDKN3-208ENST00000555837 CCL18P55774 89 aa16.09■□□□□ 0.17
CDKN3-208ENST00000555837 COX8CQ7Z4L0 72 aa16.09■□□□□ 0.17
CDKN3-208ENST00000555837 LINC00479Q96M42 142 aa16.09■□□□□ 0.17
CDKN3-208ENST00000555837 MDFICQ9P1T7 246 aa16.09■□□□□ 0.17
CDKN3-208ENST00000555837 IGHV3-16A0A0C4DH30 117 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 CIDEAO60543 219 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 NUDT3O95989 172 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 TYMSP04818 313 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 Q6ZQT7 251 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 MRPL16Q9NX20 251 aaKnown RBP16.08■□□□□ 0.16
CDKN3-208ENST00000555837 GNG13Q9P2W3 67 aa16.08■□□□□ 0.16
CDKN3-208ENST00000555837 TRAV26-1A0A087WT03 109 aa16.07■□□□□ 0.16
CDKN3-208ENST00000555837 S100A4P26447 101 aaKnown RBP16.07■□□□□ 0.16
CDKN3-208ENST00000555837 BLOC1S1P78537 153 aa16.07■□□□□ 0.16
CDKN3-208ENST00000555837 FAM162BQ5T6X4 162 aa16.07■□□□□ 0.16
CDKN3-208ENST00000555837 GNRH2O43555 120 aa16.06■□□□□ 0.16
CDKN3-208ENST00000555837 LTAP01374 205 aa16.06■□□□□ 0.16
CDKN3-208ENST00000555837 PRO0255Q9UI72 69 aa16.06■□□□□ 0.16
CDKN3-208ENST00000555837 ALMS1Q8TCU4 4167 aa16.05■□□□□ 0.16
CDKN3-208ENST00000555837 PDE6DO43924 150 aa16.05■□□□□ 0.16
CDKN3-208ENST00000555837 ZNF80P51504 273 aaPredicted RBP16.05■□□□□ 0.16
CDKN3-208ENST00000555837 PLECQ15149 4684 aaKnown RBP16.05■□□□□ 0.16
CDKN3-208ENST00000555837 TRGV4A0A0C4DH28 118 aa16.04■□□□□ 0.16
CDKN3-208ENST00000555837 ORM1P02763 201 aa16.04■□□□□ 0.16
CDKN3-208ENST00000555837 PTH2Q96A98 100 aa16.04■□□□□ 0.16
CDKN3-208ENST00000555837 TRAV4A0A0B4J268 109 aa16.03■□□□□ 0.16
CDKN3-208ENST00000555837 ASIPP42127 132 aa16.03■□□□□ 0.16
CDKN3-208ENST00000555837 OR4C5Q8NGB2 326 aa16.03■□□□□ 0.16
CDKN3-208ENST00000555837 HHLA3Q9XRX5 114 aa16.03■□□□□ 0.16
CDKN3-208ENST00000555837 B4DEV8 164 aa16.02■□□□□ 0.16
CDKN3-208ENST00000555837 PAX4O43316 350 aa16.02■□□□□ 0.16
CDKN3-208ENST00000555837 HOXA5P20719 270 aa16.02■□□□□ 0.16
CDKN3-208ENST00000555837 MEF2BQ02080 365 aaPredicted RBP16.02■□□□□ 0.16
CDKN3-208ENST00000555837 PIK3CD-AS1Q5SR53 167 aa16.02■□□□□ 0.16
CDKN3-208ENST00000555837 BAGE2Q86Y30 109 aa16.02■□□□□ 0.16
CDKN3-208ENST00000555837 SCO2A0A1W2PP80 73 aa16.01■□□□□ 0.15
CDKN3-208ENST00000555837 ZNF876PQ49A33 203 aa16.01■□□□□ 0.15
CDKN3-208ENST00000555837 ZC2HC1AQ96GY0 325 aa16.01■□□□□ 0.15
CDKN3-208ENST00000555837 VAX2Q9UIW0 290 aa16.01■□□□□ 0.15
CDKN3-208ENST00000555837 SACSQ9NZJ4 4579 aa16.01■□□□□ 0.15
CDKN3-208ENST00000555837 A0A0J9YY99 117 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 ZNF674Q2M3X9 581 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 PCNPQ8WW12 178 aaKnown RBP16■□□□□ 0.15
CDKN3-208ENST00000555837 C11orf52Q96A22 123 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 SMIM12Q96EX1 92 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 BIN3Q9NQY0 253 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 ICOSQ9Y6W8 199 aa16■□□□□ 0.15
CDKN3-208ENST00000555837 A0A1B0GVG6 124 aa15.99■□□□□ 0.15
CDKN3-208ENST00000555837 IGHV3-53P01767 116 aa15.99■□□□□ 0.15
CDKN3-208ENST00000555837 SYT8Q8NBV8 401 aa15.99■□□□□ 0.15
CDKN3-208ENST00000555837 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
CDKN3-208ENST00000555837 SH2D1AO60880 128 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 BCL2P10415 239 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 CCL20P78556 96 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 RYR3Q15413 4870 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 MRPL23Q16540 153 aaKnown RBP15.98■□□□□ 0.15
CDKN3-208ENST00000555837 DNLZQ5SXM8 178 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 IL36BQ9NZH7 164 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 C11orf21Q9P2W6 132 aa15.98■□□□□ 0.15
CDKN3-208ENST00000555837 C9JCJ5 164 aa15.97■□□□□ 0.15
CDKN3-208ENST00000555837 RPL35P42766 123 aaKnown RBP15.97■□□□□ 0.15
CDKN3-208ENST00000555837 ALKAL2Q6UX46 152 aa15.97■□□□□ 0.15
CDKN3-208ENST00000555837 SH2D6Q7Z4S9 175 aa15.97■□□□□ 0.15
CDKN3-208ENST00000555837 DNAH1Q9P2D7 4330 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 IGKV3D-20A0A0C4DH25 116 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 A8MWV9 139 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 KRBOX1C9JBD0 128 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 CRYBA4P53673 196 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 FHL2Q14192 279 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 LINC01559Q495D7 138 aa15.96■□□□□ 0.15
CDKN3-208ENST00000555837 MUC4Q99102 2169 aa15.96■□□□□ 0.14
CDKN3-208ENST00000555837 RYR2Q92736 4967 aa15.95■□□□□ 0.14
CDKN3-208ENST00000555837 MED9Q9NWA0 146 aa15.95■□□□□ 0.14
CDKN3-208ENST00000555837 CXCL1P09341 107 aa15.94■□□□□ 0.14
CDKN3-208ENST00000555837 RNASE3P12724 160 aaKnown RBP15.94■□□□□ 0.14
CDKN3-208ENST00000555837 SOHLH1Q5JUK2 328 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms