RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 NAT8BQ9UHF3 227 aa7.12□□□□□ -1.27
HNRNPC-220ENST00000555585 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 SPINK4O60575 86 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 AMBPP02760 352 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 MUC21Q5SSG8 566 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 BTF3L4Q96K17 158 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 FAM210BQ96KR6 192 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 PGLYRP4Q96LB8 373 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 GFRA4Q9GZZ7 299 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 SORL1Q92673 2214 aa7.11□□□□□ -1.27
HNRNPC-220ENST00000555585 TRBV24-1A0A075B6N3 115 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 FAM231BA6NCW3 169 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 HIGD1CA8MV81 97 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 GTSF1Q8WW33 167 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 BORCS7Q96B45 105 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 SRD5A3Q9H8P0 318 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 XCL2Q9UBD3 114 aa7.1□□□□□ -1.27
HNRNPC-220ENST00000555585 CRXO43186 299 aaPredicted RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 INSP01308 110 aa7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 RAB5AP20339 215 aa7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 RPS10P46783 165 aaKnown RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 MRPL54Q6P161 138 aaKnown RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 MORN3Q6PF18 240 aaPredicted RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 FER1L6-AS1Q8NA97 138 aa7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 KCNS1Q96KK3 526 aa7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 PYGO2Q9BRQ0 406 aa7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 ZMAT5Q9UDW3 170 aaKnown RBP7.09□□□□□ -1.27
HNRNPC-220ENST00000555585 IGHV1OR15-1A0A075B7D0 117 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 GNRH2O43555 120 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 S100A4P26447 101 aaKnown RBP7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 ASIPP42127 132 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 RIPPLY3P57055 190 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 SSTP61278 116 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 Q8N1Y9 231 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 LINC01587Q99440 93 aa7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 TIMM8BQ9Y5J9 83 aaPredicted RBP7.08□□□□□ -1.28
HNRNPC-220ENST00000555585 MUC21A0A0G2JKD1 596 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 MUC21A0A140T8X8 626 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 G3V4G9 280 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 TYMSP04818 313 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 RBMY1A1P0DJD3 496 aaKnown RBP7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 RBMY1CP0DJD4 496 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 HTN1P15515 57 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 FOXA3P55318 350 aaPredicted RBP7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 KRTAP10-11P60412 298 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 RAB4BP61018 213 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 RIGQ13278 110 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 RBMY1FQ15415 496 aaKnown RBP7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 C20orf144Q9BQM9 153 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 C1QTNF4Q9BXJ3 329 aa7.07□□□□□ -1.28
HNRNPC-220ENST00000555585 VWFP04275 2813 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 TRGV11A0A075B6L2 103 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 IGHV3OR16-12A0A075B7B8 117 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 LOC102724200A0A096LPH7 203 aaPredicted RBP7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 A0A1B0GUT8 65 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 CBY3A6NI87 242 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 F2Z2F3 143 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 H3BVH4 76 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 ARMS2P0C7Q2 107 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 CAMPP49913 170 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 EGFEM1PQ0D2K5 195 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 ATP5L2Q7Z4Y8 100 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 ZNF575Q86XF7 245 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 CSTL1Q9H114 145 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 TP53TG3Q9ULZ0 132 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 GOLT1BQ9Y3E0 138 aa7.06□□□□□ -1.28
HNRNPC-220ENST00000555585 SNURFLB1AK76 121 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 FRMD6-AS1P0C7T7 363 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 CTRLP40313 264 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 HBBP68871 147 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 TWIST1Q15672 202 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 TDRG1Q3Y452 100 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 COX19Q49B96 90 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 DNLZQ5SXM8 178 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 WDR73Q6P4I2 378 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 C1orf158Q8N1D5 194 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 TMEM256Q8N2U0 113 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 FRZBQ92765 325 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 TMA7Q9Y2S6 64 aaKnown RBP7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 TRAPPC1Q9Y5R8 145 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
HNRNPC-220ENST00000555585 STAB1Q9NY15 2570 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 A0A1B0GW15 77 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 C1orf196B1AJZ1 125 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 SPRY2O43597 315 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 SNAI2O43623 268 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 S100A8P05109 93 aa7.04□□□□□ -1.28
HNRNPC-220ENST00000555585 OR5AL1P0C617 328 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms