RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LINC00588Q9Y4M8 146 aa14.26□□□□□ -0.13
VTI1B-205ENST00000555543 K7EQM0 130 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 GNRH2O43555 120 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 IGHV3-53P01767 116 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 FLI1Q01543 452 aaPredicted RBP14.25□□□□□ -0.13
VTI1B-205ENST00000555543 IFITM2Q01629 132 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 SLC51BQ86UW2 128 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 TMEM75Q8N9X5 138 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 LINC00479Q96M42 142 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 C11orf21Q9P2W6 132 aa14.25□□□□□ -0.13
VTI1B-205ENST00000555543 IGHV3-16A0A0C4DH30 117 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 FAM74A7A6NL05 159 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 H3BNG1 76 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 TYMSP04818 313 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 FAM3BP58499 235 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-205ENST00000555543 PRNTQ86SH4 94 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 ZNRF2Q8NHG8 242 aa14.24□□□□□ -0.13
VTI1B-205ENST00000555543 TRAV34A0A0B4J273 112 aa14.23□□□□□ -0.13
VTI1B-205ENST00000555543 RTL8CO15255 209 aa14.23□□□□□ -0.13
VTI1B-205ENST00000555543 CCL18P55774 89 aa14.23□□□□□ -0.13
VTI1B-205ENST00000555543 ZNF471Q9BX82 626 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-205ENST00000555543 GCGP01275 180 aa14.22□□□□□ -0.13
VTI1B-205ENST00000555543 IFNA7P01567 189 aa14.22□□□□□ -0.13
VTI1B-205ENST00000555543 SEC11BP0C7V7 166 aa14.22□□□□□ -0.13
VTI1B-205ENST00000555543 SPXQ9BT56 116 aa14.22□□□□□ -0.13
VTI1B-205ENST00000555543 PEX7O00628 323 aa14.21□□□□□ -0.13
VTI1B-205ENST00000555543 SFTA3P0C7M3 94 aa14.21□□□□□ -0.13
VTI1B-205ENST00000555543 RASL10AQ92737 203 aa14.21□□□□□ -0.13
VTI1B-205ENST00000555543 SDF2L1Q9HCN8 221 aa14.21□□□□□ -0.13
VTI1B-205ENST00000555543 A0A096LPF7 62 aa14.2□□□□□ -0.14
VTI1B-205ENST00000555543 PFN1P07737 140 aaKnown RBP14.2□□□□□ -0.14
VTI1B-205ENST00000555543 EIF5AP63241 154 aaKnown RBP14.2□□□□□ -0.14
VTI1B-205ENST00000555543 FHL2Q14192 279 aa14.2□□□□□ -0.14
VTI1B-205ENST00000555543 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
VTI1B-205ENST00000555543 STOML3Q8TAV4 291 aa14.2□□□□□ -0.14
VTI1B-205ENST00000555543 ARL2-SNX15V9GYD0 113 aa14.2□□□□□ -0.14
VTI1B-205ENST00000555543 FBLL1A6NHQ2 334 aaKnown RBP14.19□□□□□ -0.14
VTI1B-205ENST00000555543 ESRGQ1W209 222 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 LINC00336Q6ZUF6 198 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 Q86TA4 180 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 FAM213BQ8TBF2 198 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 ZNF479Q96JC4 524 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 KCNS1Q96KK3 526 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 PKD1P98161 4303 aa14.19□□□□□ -0.14
VTI1B-205ENST00000555543 PAX4O43316 350 aa14.18□□□□□ -0.14
VTI1B-205ENST00000555543 TPT1P13693 172 aaKnown RBP14.18□□□□□ -0.14
VTI1B-205ENST00000555543 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
VTI1B-205ENST00000555543 NKX6-2Q9C056 277 aaPredicted RBP14.18□□□□□ -0.14
VTI1B-205ENST00000555543 PRO0255Q9UI72 69 aa14.18□□□□□ -0.14
VTI1B-205ENST00000555543 PKHD1P08F94 4074 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 A0A1B0GV50 99 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 UMAD1C9J7I0 102 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 M0R2P5 195 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 CRYBA4P53673 196 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 SAPCD1Q5SSQ6 148 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 MBD3L1Q8WWY6 194 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 HIST1H2BAQ96A08 127 aa14.17□□□□□ -0.14
VTI1B-205ENST00000555543 NBDYA0A0U1RRE5 68 aa14.16□□□□□ -0.14
VTI1B-205ENST00000555543 PPT1P50897 306 aa14.16□□□□□ -0.14
VTI1B-205ENST00000555543 SFT2D1Q8WV19 159 aa14.16□□□□□ -0.14
VTI1B-205ENST00000555543 HHLA3Q9XRX5 114 aa14.16□□□□□ -0.14
VTI1B-205ENST00000555543 TRGV4A0A0C4DH28 118 aa14.15□□□□□ -0.14
VTI1B-205ENST00000555543 CST9LP1Q5W188 147 aa14.15□□□□□ -0.14
VTI1B-205ENST00000555543 MRPS16Q9Y3D3 137 aaKnown RBP14.15□□□□□ -0.14
VTI1B-205ENST00000555543 ICOSQ9Y6W8 199 aa14.15□□□□□ -0.14
VTI1B-205ENST00000555543 TRAV4A0A0B4J268 109 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 A0A1B0GVY2 172 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 PRSS29PA6NIE9 313 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 PAGE4O60829 102 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 C9orf85Q96MD7 179 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 UPK3BQ9BT76 320 aa14.14□□□□□ -0.15
VTI1B-205ENST00000555543 IGKV3D-20A0A0C4DH25 116 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 SLAQ13239 276 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 C1orf134Q5TEV5 83 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 DPPA3Q6W0C5 159 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 ZC2HC1AQ96GY0 325 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 KRTAP1-5Q9BYS1 174 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 Q9H8V8 135 aa14.13□□□□□ -0.15
VTI1B-205ENST00000555543 C9JCJ5 164 aa14.12□□□□□ -0.15
VTI1B-205ENST00000555543 RNASE3P12724 160 aaKnown RBP14.12□□□□□ -0.15
VTI1B-205ENST00000555543 EIF5AL1Q6IS14 154 aaKnown RBP14.12□□□□□ -0.15
VTI1B-205ENST00000555543 OR4C5Q8NGB2 326 aa14.12□□□□□ -0.15
VTI1B-205ENST00000555543 FMC1Q96HJ9 113 aa14.12□□□□□ -0.15
VTI1B-205ENST00000555543 TCEAL7Q9BRU2 100 aa14.12□□□□□ -0.15
VTI1B-205ENST00000555543 H2AFB1P0C5Y9 115 aa14.11□□□□□ -0.15
VTI1B-205ENST00000555543 CRIP1P50238 77 aa14.11□□□□□ -0.15
VTI1B-205ENST00000555543 ALKAL2Q6UX46 152 aa14.11□□□□□ -0.15
VTI1B-205ENST00000555543 DNAH11Q96DT5 4516 aa14.11□□□□□ -0.15
VTI1B-205ENST00000555543 DYNC1H1Q14204 4646 aaKnown RBP14.1□□□□□ -0.15
VTI1B-205ENST00000555543 KIAA1109Q2LD37 5005 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 FABP5P3A8MUU1 101 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 UBE2G1P62253 170 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 ZNF876PQ49A33 203 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 COX8CQ7Z4L0 72 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 ZFP30Q9Y2G7 519 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 HERC2O95714 4834 aa14.1□□□□□ -0.15
VTI1B-205ENST00000555543 TRBV6-1A0A0K0K1D8 114 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 PGPEP1LA6NFU8 196 aa14.09□□□□□ -0.15
VTI1B-205ENST00000555543 K7EQD1 137 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms