RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LINC00612Q8N6U2 182 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 KCNS1Q96KK3 526 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 MUC4Q99102 2169 aa8.54□□□□□ -1.04
SRP54-206ENST00000555317 TRAV34A0A0B4J273 112 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 SPINK4O60575 86 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 LGALS9BQ3B8N2 356 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 LGALSLQ3ZCW2 172 aaPredicted RBP8.53□□□□□ -1.04
SRP54-206ENST00000555317 SLC51BQ86UW2 128 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 C8orf49Q96NF6 230 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
SRP54-206ENST00000555317 KMT2AQ03164 3969 aa8.53□□□□□ -1.04
SRP54-206ENST00000555317 PAGE4O60829 102 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 IGLV2-11P01706 119 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 PFN1P07737 140 aaKnown RBP8.52□□□□□ -1.05
SRP54-206ENST00000555317 AKR1C3P42330 323 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 Q86TA4 180 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 POM121L12Q8N7R1 296 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 SPXQ9BT56 116 aa8.52□□□□□ -1.05
SRP54-206ENST00000555317 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
SRP54-206ENST00000555317 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
SRP54-206ENST00000555317 MDFICQ9P1T7 246 aa8.51□□□□□ -1.05
SRP54-206ENST00000555317 A0A0J9YY99 117 aa8.5□□□□□ -1.05
SRP54-206ENST00000555317 TYMSP04818 313 aa8.5□□□□□ -1.05
SRP54-206ENST00000555317 C18orf15Q96N68 181 aa8.5□□□□□ -1.05
SRP54-206ENST00000555317 MANBALQ9NQG1 85 aa8.5□□□□□ -1.05
SRP54-206ENST00000555317 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
SRP54-206ENST00000555317 NACAE9PAV3 2078 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 IGHV3-16A0A0C4DH30 117 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 M0R2P5 195 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 GNRH2O43555 120 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 IFNA1P01562 189 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
SRP54-206ENST00000555317 HOXA5P20719 270 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 SULT1A2P50226 295 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 ZNF80P51504 273 aaPredicted RBP8.49□□□□□ -1.05
SRP54-206ENST00000555317 CCL18P55774 89 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 RNF212Q495C1 297 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 C9orf62Q8N4C0 152 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 GNG13Q9P2W3 67 aa8.49□□□□□ -1.05
SRP54-206ENST00000555317 DNAH6Q9C0G6 4158 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 FABP5P3A8MUU1 101 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 S100A4P26447 101 aaKnown RBP8.48□□□□□ -1.05
SRP54-206ENST00000555317 SLAQ13239 276 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 FAM162BQ5T6X4 162 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 VPS13DQ5THJ4 4388 aa8.48□□□□□ -1.05
SRP54-206ENST00000555317 TRAV1-1A0A0B4J248 108 aa8.47□□□□□ -1.05
SRP54-206ENST00000555317 SCO2A0A1W2PP80 73 aa8.47□□□□□ -1.05
SRP54-206ENST00000555317 H3BNG1 76 aa8.47□□□□□ -1.05
SRP54-206ENST00000555317 ORM1P02763 201 aa8.47□□□□□ -1.05
SRP54-206ENST00000555317 FAM3BP58499 235 aaPredicted RBP8.47□□□□□ -1.05
SRP54-206ENST00000555317 RASL10AQ92737 203 aa8.47□□□□□ -1.05
SRP54-206ENST00000555317 TRBV6-1A0A0K0K1D8 114 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 B4DEV8 164 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 C9JCJ5 164 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 PAX4O43316 350 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 LTAP01374 205 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 ASIPP42127 132 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 OR4C5Q8NGB2 326 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 PCNPQ8WW12 178 aaKnown RBP8.46□□□□□ -1.06
SRP54-206ENST00000555317 ZC2HC1AQ96GY0 325 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 TXNDC17Q9BRA2 123 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
SRP54-206ENST00000555317 TRAV4A0A0B4J268 109 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 C11orf21Q9P2W6 132 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 ICOSQ9Y6W8 199 aa8.45□□□□□ -1.06
SRP54-206ENST00000555317 IGLV2-18A0A075B6J9 118 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 M0R036 132 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 M0R2N4 97 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 SH2D1AO60880 128 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 SFTA3P0C7M3 94 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 CCL20P78556 96 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 BAGE2Q86Y30 109 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 NHLRC2Q8NBF2 726 aa8.44□□□□□ -1.06
SRP54-206ENST00000555317 PDE6DO43924 150 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 TAGLN2P37802 199 aaKnown RBP8.43□□□□□ -1.06
SRP54-206ENST00000555317 RPL35P42766 123 aaKnown RBP8.43□□□□□ -1.06
SRP54-206ENST00000555317 NKX2-5P52952 324 aaPredicted RBP8.43□□□□□ -1.06
SRP54-206ENST00000555317 BLOC1S1P78537 153 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 MEF2BQ02080 365 aaPredicted RBP8.43□□□□□ -1.06
SRP54-206ENST00000555317 FHL2Q14192 279 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 ALKAL2Q6UX46 152 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 COX8CQ7Z4L0 72 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 C9orf85Q96MD7 179 aa8.43□□□□□ -1.06
SRP54-206ENST00000555317 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 H3BVH4 76 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 BCL2P10415 239 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 CRYBA4P53673 196 aa8.42□□□□□ -1.06
SRP54-206ENST00000555317 MRPL23Q16540 153 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms