RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SPINK13Q1W4C9 94 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 AMTNQ6UX39 209 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 NEU1Q99519 415 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 PYGO2Q9BRQ0 406 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 KRTAP17-1Q9BYP8 105 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 NAGKQ9UJ70 344 aa13□□□□□ -0.33
PSEN1-212ENST00000555254 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
PSEN1-212ENST00000555254 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
PSEN1-212ENST00000555254 M0R2Z0 102 aa12.99□□□□□ -0.33
PSEN1-212ENST00000555254 PRR9Q5T870 116 aa12.99□□□□□ -0.33
PSEN1-212ENST00000555254 PGLYRP4Q96LB8 373 aa12.99□□□□□ -0.33
PSEN1-212ENST00000555254 CXCL1P09341 107 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 GZMBP10144 247 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 RPS10P46783 165 aaKnown RBP12.98□□□□□ -0.33
PSEN1-212ENST00000555254 FXYD7P58549 80 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 COX19Q49B96 90 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 FAM159AQ6UWV7 190 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 NUP35Q8NFH5 326 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 KCNS1Q96KK3 526 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
PSEN1-212ENST00000555254 FOXA3P55318 350 aaPredicted RBP12.97□□□□□ -0.33
PSEN1-212ENST00000555254 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
PSEN1-212ENST00000555254 TRPT1Q86TN4 253 aaKnown RBP12.97□□□□□ -0.33
PSEN1-212ENST00000555254 FER1L6-AS1Q8NA97 138 aa12.97□□□□□ -0.33
PSEN1-212ENST00000555254 TRAV12-2A0A075B6T6 113 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 GRIFINA4D1Z8 144 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 SPINK4O60575 86 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 RIGQ13278 110 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 SRD5A3Q9H8P0 318 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
PSEN1-212ENST00000555254 IGKV3D-20A0A0C4DH25 116 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 RBMY1BA6NDE4 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 RBMY1EA6NEQ0 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 F2Z2F3 143 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 INSP01308 110 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 TYMSP04818 313 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 S100A8P05109 93 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 RBMY1DP0C7P1 496 aaKnown RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 S100A4P26447 101 aaKnown RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 ASIPP42127 132 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 ANXA2RQ3ZCQ2 193 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 MRPL54Q6P161 138 aaKnown RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 WDR73Q6P4I2 378 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 MORN3Q6PF18 240 aaPredicted RBP12.95□□□□□ -0.34
PSEN1-212ENST00000555254 ATP5L2Q7Z4Y8 100 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
PSEN1-212ENST00000555254 A0A1B0GUT8 65 aa12.94□□□□□ -0.34
PSEN1-212ENST00000555254 ZNF324O75467 553 aaPredicted RBP12.94□□□□□ -0.34
PSEN1-212ENST00000555254 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
PSEN1-212ENST00000555254 RASL11AQ6T310 242 aa12.94□□□□□ -0.34
PSEN1-212ENST00000555254 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
PSEN1-212ENST00000555254 C20orf144Q9BQM9 153 aa12.94□□□□□ -0.34
PSEN1-212ENST00000555254 SORL1Q92673 2214 aa12.94□□□□□ -0.34
PSEN1-212ENST00000555254 IGHV1OR15-1A0A075B7D0 117 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 A0A1B0GW15 77 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 C1orf196B1AJZ1 125 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 RAB4BP61018 213 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 LYZL1Q6UWQ5 148 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 C1QTNF4Q9BXJ3 329 aa12.93□□□□□ -0.34
PSEN1-212ENST00000555254 Q6ZQT7 251 aa12.92□□□□□ -0.34
PSEN1-212ENST00000555254 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
PSEN1-212ENST00000555254 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
PSEN1-212ENST00000555254 XCL2Q9UBD3 114 aa12.92□□□□□ -0.34
PSEN1-212ENST00000555254 TRAPPC1Q9Y5R8 145 aa12.92□□□□□ -0.34
PSEN1-212ENST00000555254 TRGV11A0A075B6L2 103 aa12.91□□□□□ -0.34
PSEN1-212ENST00000555254 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
PSEN1-212ENST00000555254 HBBP68871 147 aa12.91□□□□□ -0.34
PSEN1-212ENST00000555254 LINC01587Q99440 93 aa12.91□□□□□ -0.34
PSEN1-212ENST00000555254 TIMM8BQ9Y5J9 83 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-212ENST00000555254 CRXO43186 299 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-212ENST00000555254 GNRH2O43555 120 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 MT-ND6P03923 174 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 MED14OSP0DP75 135 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 CTRLP40313 264 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 CAMPP49913 170 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 CACNG7P62955 275 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 TMEM256Q8N2U0 113 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 GOLT1BQ9Y3E0 138 aa12.9□□□□□ -0.34
PSEN1-212ENST00000555254 CBY3A6NI87 242 aa12.89□□□□□ -0.35
PSEN1-212ENST00000555254 RAB5BP61020 215 aa12.89□□□□□ -0.35
PSEN1-212ENST00000555254 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
PSEN1-212ENST00000555254 FRZBQ92765 325 aa12.89□□□□□ -0.35
PSEN1-212ENST00000555254 TMA7Q9Y2S6 64 aaKnown RBP12.89□□□□□ -0.35
PSEN1-212ENST00000555254 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 H3BVH4 76 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 HLA-DQA1P01909 254 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 ARMS2P0C7Q2 107 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 SSTP61278 116 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 TWIST1Q15672 202 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 SPANXN1Q5VSR9 72 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 Q8N1Y9 231 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 CSTL1Q9H114 145 aa12.88□□□□□ -0.35
PSEN1-212ENST00000555254 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms