RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 TRAV8-6A0A0B4J262 113 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 A1L4Q6 167 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 KIR3DS1Q14943 382 aa11.95□□□□□ -0.5
ARHGEF40-203ENST00000554514 NDUFS8O00217 210 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 CD5LO43866 347 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 ATP5J2P56134 94 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 PRORYQ9H606 182 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 S100A4P26447 101 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 KLK9Q2XQG4 91 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 BOD1L2Q8IYS8 172 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 RAB37Q96AX2 223 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 KLK9Q9UKQ9 250 aa11.94□□□□□ -0.5
ARHGEF40-203ENST00000554514 GPHB5Q86YW7 130 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 IGKV2D-26A0A0A0MRZ7 120 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 EDN2P20800 178 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 OR10J6PQ8NGY7 276 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 SMIM17P0DL12 118 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 RNASE4P34096 147 aaKnown RBP11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 ODF1Q14990 250 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 Q8N8P6 123 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 TMEM160Q9NX00 188 aa11.93□□□□□ -0.5
ARHGEF40-203ENST00000554514 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
ARHGEF40-203ENST00000554514 NRGNQ92686 78 aa11.92□□□□□ -0.5
ARHGEF40-203ENST00000554514 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
ARHGEF40-203ENST00000554514 DEFB104AQ8WTQ1 72 aa11.92□□□□□ -0.5
ARHGEF40-203ENST00000554514 NRACQ8N912 160 aa11.91□□□□□ -0.5
ARHGEF40-203ENST00000554514 MGPP08493 103 aa11.91□□□□□ -0.5
ARHGEF40-203ENST00000554514 C10orf105Q8TEF2 133 aa11.91□□□□□ -0.5
ARHGEF40-203ENST00000554514 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
ARHGEF40-203ENST00000554514 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
ARHGEF40-203ENST00000554514 C14orf178Q8N769 122 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 DPF1Q92782 380 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 DOPEY2Q9Y3R5 2298 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 IGLV2-18A0A075B6J9 118 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 TMEM8BA6NDV4 472 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 NDUFA4O00483 81 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 IGKCP01834 107 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 LAGE3Q14657 143 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 USP9XQ93008 2570 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF40-203ENST00000554514 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.51
ARHGEF40-203ENST00000554514 ZFAND2AQ8N6M9 145 aa11.9□□□□□ -0.51
ARHGEF40-203ENST00000554514 RHPN1-AS1Q9BWJ2 59 aa11.9□□□□□ -0.51
ARHGEF40-203ENST00000554514 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.51
ARHGEF40-203ENST00000554514 K7EP13 123 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 GNRH2O43555 120 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 ZC2HC1BQ5TFG8 222 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 MYOZ3Q8TDC0 251 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 PHLDA3Q9Y5J5 127 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 H3BUT2 72 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 SEC11AP67812 179 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 MEGF9Q9H1U4 602 aa11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 MRPL35Q9NZE8 188 aaKnown RBP11.89□□□□□ -0.51
ARHGEF40-203ENST00000554514 OR9G4Q8NGQ1 327 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 PIEZO1Q92508 2521 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 POLQO75417 2590 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 AVPP01185 164 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 IGHG2P01859 326 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 GCSHP23434 173 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 HSD52Q0P140 79 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 ADAMTSL5Q6ZMM2 481 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
ARHGEF40-203ENST00000554514 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 A6NDN8 102 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 K7EMI3 77 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 CENPEQ02224 2701 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 A6NDX4 124 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 DPM2O94777 84 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 ASIPP42127 132 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 USP9YO00507 2555 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 SOCS3O14543 225 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 OVOL1O14753 267 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 MSMBP08118 114 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
ARHGEF40-203ENST00000554514 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 MAPK1IP1LQ8NDC0 245 aa11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 GAGE10A6NGK3 116 aa11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 SRSF1Q07955 248 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 USMG5Q96IX5 58 aa11.86□□□□□ -0.51
ARHGEF40-203ENST00000554514 CACNA1AO00555 2505 aa11.85□□□□□ -0.51
ARHGEF40-203ENST00000554514 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
ARHGEF40-203ENST00000554514 ATP5LO75964 103 aa11.85□□□□□ -0.51
ARHGEF40-203ENST00000554514 IGKV3-20P01619 116 aa11.85□□□□□ -0.51
ARHGEF40-203ENST00000554514 SMIM2Q9BVW6 85 aa11.84□□□□□ -0.51
ARHGEF40-203ENST00000554514 IGSF10Q6WRI0 2623 aa11.84□□□□□ -0.51
ARHGEF40-203ENST00000554514 RASL10AQ92737 203 aa11.84□□□□□ -0.51
ARHGEF40-203ENST00000554514 ZMAT4Q9H898 229 aa11.84□□□□□ -0.51
ARHGEF40-203ENST00000554514 IGHV4-4A0A075B6R2 117 aa11.83□□□□□ -0.51
ARHGEF40-203ENST00000554514 GAGE12BA1L429 117 aa11.83□□□□□ -0.51
ARHGEF40-203ENST00000554514 CST9LQ9H4G1 147 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 292.2 ms