RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ZNF256Q9Y2P7 627 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-227ENST00000554491 HLA-DRB4X5D2U9 266 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 MEGF8Q7Z7M0 2845 aa3.4□□□□□ -1.87
ATXN3-227ENST00000554491 CPAMD8Q8IZJ3 1885 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 HRNRQ86YZ3 2850 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TRBV19A0A075B6N1 114 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TRAV8-2A0A0B4J237 113 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TRAV8-4A0A0B4J246 113 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 LINC01619G3V211 115 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 BMPR1BO00238 502 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ATOX1O00244 68 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 BUB3O43684 328 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 CST7O76096 145 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 LEPROTL1O95214 131 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ASAH2BP0C7U1 165 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 CXCL5P42830 114 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 UBE2E1P51965 193 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 CLDN17P56750 224 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 FXYD6P3P58550 94 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 HERV-K104P61576 105 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 HBG1P69891 147 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 HBG2P69892 147 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 DAZ2Q13117 558 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 RTL8BQ17RB0 113 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 DGAT2L6Q6ZPD8 337 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ZNF493Q6ZR52 646 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 C6orf201Q7Z4U5 140 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 VN1R4Q7Z5H5 301 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 DAZ4Q86SG3 579 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 HMGN2P46Q86SG4 172 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TRAPPC6BQ86SZ2 158 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 PRR15Q8IV56 129 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ZCCHC24Q8N2G6 241 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 OR52N5Q8NH56 324 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 LRRC29Q8WV35 223 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TMEM158Q8WZ71 300 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 UBE2E2Q96LR5 201 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 MGST2Q99735 147 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ZNF665Q9H7R5 613 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ZNF286AQ9HBT8 521 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 DAZ1Q9NQZ3 744 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 DAZ3Q9NR90 486 aaKnown RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 OTORQ9NRC9 128 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 CKLFQ9UBR5 152 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 ANAPC10Q9UM13 185 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 KLK5Q9Y337 293 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-227ENST00000554491 SELENOKQ9Y6D0 94 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 TMEM14AQ9Y6G1 99 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 MGAM2Q2M2H8 2515 aa3.39□□□□□ -1.87
ATXN3-227ENST00000554491 PKD1L1Q8TDX9 2849 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 ANK3Q12955 4377 aaKnown RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 ZANQ9Y493 2812 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 TRBV5-7A0A0A0MS05 114 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 TRGV5A0A0B4J1U4 118 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 TRBV5-5A0A0J9YX44 114 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 KNCNA6PVL3 124 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 H3BT86 120 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 APOHP02749 345 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 ACYP1P07311 99 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 KRTAP10-12P60413 245 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 NPC2P61916 151 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 RPL30P62888 115 aaKnown RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 SUPT4H1P63272 117 aaKnown RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 IGLV3-21P80748 117 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 QRFPP83859 136 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 RPL18AQ02543 176 aaKnown RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 ARL16Q0P5N6 197 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 LGALS9BQ3B8N2 356 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 ZC2HC1BQ5TFG8 222 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 HIST2H2BDQ6DRA6 164 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 GFRALQ6UXV0 394 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 RNF182Q8N6D2 247 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 FAM3DQ96BQ1 224 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 IGF2BP2-AS1Q96M15 143 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 HDHD3Q9BSH5 251 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-227ENST00000554491 SRXN1Q9BYN0 137 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 DPH3P1Q9H4G8 78 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 C11orf1Q9H5F2 150 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 C16orf95Q9H693 158 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 SPTBP11277 2137 aa3.38□□□□□ -1.87
ATXN3-227ENST00000554491 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 TRAV17A0A0B4J275 112 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 A0A1B0GWA3 101 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 C4orf51C9J302 202 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 TCL1BO95988 128 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 HLA-DOBP13765 273 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 CTLA4P16410 223 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 DUTP33316 252 aaKnown RBP3.37□□□□□ -1.87
ATXN3-227ENST00000554491 CCL8P80075 99 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 SP6Q3SY56 376 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 FAM120AOSQ5T036 256 aa3.37□□□□□ -1.87
ATXN3-227ENST00000554491 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms