RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 RNF185Q96GF1 192 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SIGMAR1Q99720 223 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SPAG8Q99932 426 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 FOXC2Q99958 501 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SHANK2-AS3Q9BTD1 123 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 SPANXB1Q9NS25 103 aaPredicted RBP1.98□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM14CQ9P0S9 112 aa1.98□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV1-3A0A0C4DH29 117 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 NDUFB3O43676 98 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 CNIH1O95406 144 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 ORM1P02763 201 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TRGV3P03979 118 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 FCER1GP30273 86 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 ERCC8Q13216 396 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 DEFB109BQ30KR1 87 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 CEND1Q8N111 149 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM158Q8WZ71 300 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 MRPL35Q9NZE8 188 aaKnown RBP1.97□□□□□ -2.09
PRPF39-207ENST00000554439 NBASA2RRP1 2371 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TRAV17A0A0B4J275 112 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TRBV6-1A0A0K0K1D8 114 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 A0A1B0GW15 77 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 LINC01548A6NM66 108 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 IGLL5B9A064 214 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 PRAC2D3DTV9 90 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 E9PLD3 99 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 K7EM74 188 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 K7EQM0 130 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 NDUFA3O95167 84 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 IGKCP01834 107 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 IGHG4P01861 327 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 SMIM17P0DL12 118 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 CEACAM3P40198 252 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 RAB9AP51151 201 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 EFNA4P52798 201 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 KRTAP10-9P60411 292 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 BSPH1Q075Z2 132 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM30BQ3MIR4 351 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TMEM155Q4W5P6 130 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 Q6AWC8 147 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 GFRALQ6UXV0 394 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 FOXI2Q6ZQN5 318 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 LINC00311Q8N616 119 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 RNF182Q8N6D2 247 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 DEFB104AQ8WTQ1 72 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TNFRSF14Q92956 283 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 C20orf78Q9BR46 151 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 MAP1LC3AQ9H492 121 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 SH3BGRL2Q9UJC5 107 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 TNFRSF18Q9Y5U5 241 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
PRPF39-207ENST00000554439 SPTBN1Q01082 2364 aaKnown RBP1.96□□□□□ -2.09
PRPF39-207ENST00000554439 IGHV3-66A0A0C4DH42 116 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 BUB1B-PAK6H3BSN5 160 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 TNFRSF13BO14836 293 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-207ENST00000554439 TIMM23O14925 209 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGLC6P0CF74 106 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 GNLYP22749 145 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 C12orf74Q32Q52 190 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 NEXN-AS1Q8NBZ9 246 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF479Q96JC4 524 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 KLK15Q9H2R5 256 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 SMAD5-AS1Q9Y6J3 95 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 HRNRQ86YZ3 2850 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGLV2-18A0A075B6J9 118 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV3OR16-13A0A075B7E8 117 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 TRAV26-1A0A087WT03 109 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV3-74A0A0B4J1X5 117 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 CEACAM4O75871 244 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 DPM2O94777 84 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGLV1-47P01700 117 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 ZNF883P0CG24 379 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 CKS1BP61024 79 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGFL2Q6UWQ7 119 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IL17RELQ6ZVW7 336 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 DYNAPQ8N1N2 210 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 LYPD1Q8N2G4 141 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 PTH2Q96A98 100 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 RPEQ96AT9 228 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 HIST1H4GQ99525 98 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 HIGD1BQ9P298 99 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 C11orf21Q9P2W6 132 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 SMPXQ9UHP9 88 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 PRO0461Q9UI25 63 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 AKAP6Q13023 2319 aa1.96□□□□□ -2.1
PRPF39-207ENST00000554439 IGHV3-49A0A0A0MS15 119 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 IGKV3D-20A0A0C4DH25 116 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 A0A1B0GWB2 263 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 F8W1H4 67 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 LY6HO94772 140 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NDPQ00604 133 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 KLRD1Q13241 179 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 CRYBG3Q68DQ2 2970 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 ZFP2Q6ZN57 461 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NFE4Q86UQ8 179 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 C8orf31Q8N9H6 132 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 NUP37Q8NFH4 326 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 ONECUT1Q9UBC0 465 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 CYSLTR1Q9Y271 337 aa1.95□□□□□ -2.1
PRPF39-207ENST00000554439 UFC1Q9Y3C8 167 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 329.6 ms