RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 GIG44P09565 113 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-210ENST00000553950 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-210ENST00000553950 NUDT10Q8NFP7 164 aa10.58□□□□□ -0.72
SHMT2-210ENST00000553950 OR2D3Q8NGH3 330 aa10.58□□□□□ -0.72
SHMT2-210ENST00000553950 NUDT11Q96G61 164 aa10.58□□□□□ -0.72
SHMT2-210ENST00000553950 LINC01587Q99440 93 aa10.58□□□□□ -0.72
SHMT2-210ENST00000553950 FAM231BA6NCW3 169 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 SMIM9A6NGZ8 99 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 MED14OSP0DP75 135 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 ASIPP42127 132 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 CRIP1P50238 77 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 KIR3DS1Q14943 382 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 ANXA2RQ3ZCQ2 193 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 RNF212Q495C1 297 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 CSNK1G2-AS1Q8NCQ2 148 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 NEU1Q99519 415 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
SHMT2-210ENST00000553950 A0A1W2PPQ1 181 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 CBY3A6NI87 242 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 ZNF415Q09FC8 603 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 DEFB135Q30KP9 77 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 ZNF493Q6ZR52 646 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 TMEM263Q8WUH6 116 aaKnown RBP10.56□□□□□ -0.72
SHMT2-210ENST00000553950 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 V9GYV3 84 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 NBEAL1Q6ZS30 2694 aa10.56□□□□□ -0.72
SHMT2-210ENST00000553950 IGHV3OR16-12A0A075B7B8 117 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 C7orf77A4D0Y5 90 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 DEFB121Q5J5C9 76 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 TSKUQ8WUA8 353 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RNF183Q96D59 192 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 IMMP2LQ96T52 175 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
SHMT2-210ENST00000553950 IGKV3D-20A0A0C4DH25 116 aa10.54□□□□□ -0.72
SHMT2-210ENST00000553950 MIFP14174 115 aa10.54□□□□□ -0.72
SHMT2-210ENST00000553950 S100PP25815 95 aa10.54□□□□□ -0.72
SHMT2-210ENST00000553950 KCNIP4Q6PIL6 250 aa10.54□□□□□ -0.72
SHMT2-210ENST00000553950 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
SHMT2-210ENST00000553950 CXorf65A6NEN9 183 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 SPRY2O43597 315 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 TYMSP04818 313 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 IL36BQ9NZH7 164 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 C11orf21Q9P2W6 132 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 NAT8BQ9UHF3 227 aa10.53□□□□□ -0.72
SHMT2-210ENST00000553950 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 TMSB15BA0A087X1C1 80 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 F2Z2F3 143 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 B9D2Q9BPU9 175 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 ZMAT4Q9H898 229 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 TP53TG3Q9ULZ0 132 aa10.52□□□□□ -0.73
SHMT2-210ENST00000553950 TEX48A0A1B0GUV7 120 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 OR5AL1P0C617 328 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 HTN1P15515 57 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 CTRLP40313 264 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
SHMT2-210ENST00000553950 SPXQ9BT56 116 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 NDUFAF3Q9BU61 184 aa10.51□□□□□ -0.73
SHMT2-210ENST00000553950 IGHV3-16A0A0C4DH30 117 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 SMIM27A0A1W2PRY6 76 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 H3BVH4 76 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 IGLC6P0CF74 106 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 TCL1AP56279 114 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 CACNG7P62955 275 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 SYT8Q8NBV8 401 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 TM2D3Q9BRN9 247 aa10.5□□□□□ -0.73
SHMT2-210ENST00000553950 HIGD1CA8MV81 97 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 SNAI2O43623 268 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 FOXA3P55318 350 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-210ENST00000553950 DEFA6Q01524 100 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 Q6ZQT7 251 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 C9orf85Q96MD7 179 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 TPPP3Q9BW30 176 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 SMCO4Q9NRQ5 59 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 X6R8D5 127 aa10.49□□□□□ -0.73
SHMT2-210ENST00000553950 A0A1B0GW15 77 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 GRIFINA4D1Z8 144 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 S100A8P05109 93 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 WDR73Q6P4I2 378 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 ATP5L2Q7Z4Y8 100 aa10.48□□□□□ -0.73
SHMT2-210ENST00000553950 SBSPONQ8IVN8 264 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms