RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
SPTB-206ENST00000553938 ABCA2Q9BZC7 2435 aa9.42□□□□□ -0.9
SPTB-206ENST00000553938 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
SPTB-206ENST00000553938 OR4X2Q8NGF9 303 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 PRSS3P2Q8NHM4 247 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
SPTB-206ENST00000553938 SHANK2-AS3Q9BTD1 123 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 AP5S1Q9NUS5 200 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 ZNF492Q9P255 531 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 A0A087WX48 190 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 IGLL5B9A064 214 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 HAX1O00165 279 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 EGR2P11161 476 aaPredicted RBP9.41□□□□□ -0.9
SPTB-206ENST00000553938 DEFB1P60022 68 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 DKK2Q9UBU2 259 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 AGRNO00468 2067 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 H3BRN7 92 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 SH2D1AO60880 128 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 NPYP01303 97 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 IGHG4P01861 327 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 FCER1GP30273 86 aa9.41□□□□□ -0.9
SPTB-206ENST00000553938 NCBP2LA6PVI3 153 aaKnown RBP9.4□□□□□ -0.9
SPTB-206ENST00000553938 OR9G4Q8NGQ1 327 aa9.4□□□□□ -0.9
SPTB-206ENST00000553938 FAM110DQ8TAY7 271 aaPredicted RBP9.4□□□□□ -0.9
SPTB-206ENST00000553938 SMAD5-AS1Q9Y6J3 95 aa9.4□□□□□ -0.9
SPTB-206ENST00000553938 ZNF672Q499Z4 452 aaPredicted RBP9.4□□□□□ -0.91
SPTB-206ENST00000553938 FAM159AQ6UWV7 190 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 PHLDA1Q8WV24 401 aaPredicted RBP9.39□□□□□ -0.91
SPTB-206ENST00000553938 AJUBAQ96IF1 538 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 KAAG1Q9UBP8 84 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 PRO0461Q9UI25 63 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 NIPBLQ6KC79 2804 aaeCLIP9.39□□□□□ -0.91
SPTB-206ENST00000553938 LY6LH3BQJ8 138 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 MRPL51Q4U2R6 128 aaKnown RBP9.39□□□□□ -0.91
SPTB-206ENST00000553938 E9PLD3 99 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 CT45A10P0DMU9 189 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 TCF15Q12870 199 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 RAX2Q96IS3 184 aa9.39□□□□□ -0.91
SPTB-206ENST00000553938 IGKV2D-26A0A0A0MRZ7 120 aa9.38□□□□□ -0.91
SPTB-206ENST00000553938 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
SPTB-206ENST00000553938 HIST2H2BCQ6DN03 193 aa9.38□□□□□ -0.91
SPTB-206ENST00000553938 HIST2H2BDQ6DRA6 164 aa9.38□□□□□ -0.91
SPTB-206ENST00000553938 LINC00527Q9UJ94 153 aa9.38□□□□□ -0.91
SPTB-206ENST00000553938 USP9YO00507 2555 aaPredicted RBP9.38□□□□□ -0.91
SPTB-206ENST00000553938 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTB-206ENST00000553938 TMEM30BQ3MIR4 351 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 KHDC1LQ5JSQ8 128 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 FAM162BQ5T6X4 162 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 CHAC1Q9BUX1 264 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 A0A1W2PPR1 153 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 NDUFV3P56181 108 aaKnown RBP9.37□□□□□ -0.91
SPTB-206ENST00000553938 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 TWIST1Q15672 202 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 ZNF502Q8TBZ5 544 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 GFRA4Q9GZZ7 299 aa9.37□□□□□ -0.91
SPTB-206ENST00000553938 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 NBR2O15453 112 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
SPTB-206ENST00000553938 MEIG1Q5JSS6 88 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 FBN2P35556 2912 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 TTC32Q5I0X7 151 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 C8orf31Q8N9H6 132 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 TMEM14CQ9P0S9 112 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 TRGV3P03979 118 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 IGF1P05019 195 aa9.36□□□□□ -0.91
SPTB-206ENST00000553938 ZFP36P26651 326 aaKnown RBP9.36□□□□□ -0.91
SPTB-206ENST00000553938 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
SPTB-206ENST00000553938 CCL21O00585 134 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 CD3EP07766 207 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 G3V318 75 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 FOXC1Q12948 553 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 C4orf48Q5BLP8 95 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 IL17RELQ6ZVW7 336 aa9.35□□□□□ -0.91
SPTB-206ENST00000553938 WI2-2373I1.2A0A1W2PRP0 233 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 ORM1P02763 201 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 FAM104BQ5XKR9 115 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 CARD19Q96LW7 228 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 TRAV4A0A0B4J268 109 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 H3BVH4 76 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 CRLF1O75462 422 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 CTSGP08311 255 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 PAX8Q06710 450 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 GAGE2BQ13066 116 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 RIGQ13278 110 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 PRR25Q96S07 402 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 NOTCH3Q9UM47 2321 aa9.34□□□□□ -0.91
SPTB-206ENST00000553938 IGLV11-55A0A075B6I3 123 aa9.33□□□□□ -0.92
SPTB-206ENST00000553938 PSMB2P49721 201 aa9.33□□□□□ -0.92
SPTB-206ENST00000553938 C12orf74Q32Q52 190 aa9.33□□□□□ -0.92
SPTB-206ENST00000553938 PSMG3-AS1Q96PY0 264 aa9.33□□□□□ -0.92
SPTB-206ENST00000553938 ZFYVE26Q68DK2 2539 aa9.33□□□□□ -0.92
SPTB-206ENST00000553938 SOX21Q9Y651 276 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms