RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 SCO2A0A1W2PP80 73 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 GAGE12BA1L429 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 SPINK4O60575 86 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 GAGE7O76087 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 GAGE12FP0CL80 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 GAGE12GP0CL81 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 GAGE12IP0CL82 117 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 AKR1C3P42330 323 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 UBE2G1P62253 170 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 TMEM183BQ1AE95 376 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 KCNS1Q96KK3 526 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 NDUFAF3Q9BU61 184 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 MDFICQ9P1T7 246 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
TMEM253-202ENST00000553744 F5H768 121 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 LY6G6CO95867 125 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 TYMSP04818 313 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 LGALS9CQ6DKI2 356 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 TMEM88Q6PEY1 159 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 C18orf15Q96N68 181 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 SDF2L1Q9HCN8 221 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 C11orf21Q9P2W6 132 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 ZFP30Q9Y2G7 519 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 HYDINQ4G0P3 5121 aa8.37□□□□□ -1.07
TMEM253-202ENST00000553744 TRGV2A0A075B6R0 118 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 IGHV3-16A0A0C4DH30 117 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 GNRH2O43555 120 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 LTAP01374 205 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 LGALS9BQ3B8N2 356 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 TXNDC17Q9BRA2 123 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 SPXQ9BT56 116 aa8.36□□□□□ -1.07
TMEM253-202ENST00000553744 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
TMEM253-202ENST00000553744 IFNA1P01562 189 aa8.35□□□□□ -1.07
TMEM253-202ENST00000553744 S100A9P06702 114 aaKnown RBP8.35□□□□□ -1.07
TMEM253-202ENST00000553744 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
TMEM253-202ENST00000553744 ZC2HC1AQ96GY0 325 aa8.35□□□□□ -1.07
TMEM253-202ENST00000553744 FABP5P3A8MUU1 101 aa8.34□□□□□ -1.07
TMEM253-202ENST00000553744 BCL2P10415 239 aa8.34□□□□□ -1.07
TMEM253-202ENST00000553744 HOXA5P20719 270 aa8.34□□□□□ -1.07
TMEM253-202ENST00000553744 BLOC1S1P78537 153 aa8.34□□□□□ -1.07
TMEM253-202ENST00000553744 MEF2BQ02080 365 aaPredicted RBP8.34□□□□□ -1.07
TMEM253-202ENST00000553744 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
TMEM253-202ENST00000553744 IGKV3D-20A0A0C4DH25 116 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 SH2D1AO60880 128 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 TAGLN2P37802 199 aaKnown RBP8.33□□□□□ -1.08
TMEM253-202ENST00000553744 CRIP1P50238 77 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 OR5I1Q13606 314 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 FAM162BQ5T6X4 162 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 RASL10AQ92737 203 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
TMEM253-202ENST00000553744 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 M0R2P5 195 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 PDE6DO43924 150 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 P0DMU3 169 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 RPL35P42766 123 aaKnown RBP8.32□□□□□ -1.08
TMEM253-202ENST00000553744 ZNF674Q2M3X9 581 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 BAGE2Q86Y30 109 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 LYPD6BQ8NI32 183 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 C9orf85Q96MD7 179 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 DERL1Q9BUN8 251 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
TMEM253-202ENST00000553744 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
TMEM253-202ENST00000553744 B4DEV8 164 aa8.31□□□□□ -1.08
TMEM253-202ENST00000553744 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
TMEM253-202ENST00000553744 ORM1P02763 201 aa8.31□□□□□ -1.08
TMEM253-202ENST00000553744 RNASE3P12724 160 aaKnown RBP8.31□□□□□ -1.08
TMEM253-202ENST00000553744 HERC2O95714 4834 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 KRBOX1C9JBD0 128 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 H3BNG1 76 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 M0R036 132 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 NUDT3O95989 172 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 ASIPP42127 132 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
TMEM253-202ENST00000553744 A0A0J9YY99 117 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 S100A4P26447 101 aaKnown RBP8.29□□□□□ -1.08
TMEM253-202ENST00000553744 FHL2Q14192 279 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 CENPWQ5EE01 88 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 DNLZQ5SXM8 178 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 PTH2Q96A98 100 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 ZNF479Q96JC4 524 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
TMEM253-202ENST00000553744 RBFOX3A6NFN3 312 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 C9JCJ5 164 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 SLAQ13239 276 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 ZNF876PQ49A33 203 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 ZNF506Q5JVG8 444 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
TMEM253-202ENST00000553744 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms