RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GAGE1Q13065 139 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 GAGE4Q13068 117 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 GAGE5Q13069 117 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 DPPA3Q6W0C5 159 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 OR10G9Q8NGN4 311 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 ATP5SQ99766 215 aa8.77□□□□□ -1.01
PRPF39-204ENST00000553605 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 CTDSP2O14595 271 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 TYMSP04818 313 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 PRSS1P07477 247 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 Q0VG73 95 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 ELOBQ15370 118 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 DYNC2LI1Q8TCX1 351 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
PRPF39-204ENST00000553605 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 RBAKDNA6NC62 111 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 USP17L23D6RBM5 183 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 NBEAP1P0C6P0 100 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 LINC00694P0DN24 101 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 RPL29P47914 159 aaKnown RBP8.75□□□□□ -1.01
PRPF39-204ENST00000553605 CAV2P51636 162 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
PRPF39-204ENST00000553605 WDR73Q6P4I2 378 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 C1orf43Q9BWL3 253 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 LENEPQ9Y5L5 61 aa8.75□□□□□ -1.01
PRPF39-204ENST00000553605 A0A087WX48 190 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 A0A087WXM4 84 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 DIRC3C9JPN6 131 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 PHOX2AO14813 284 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 SCGB1D2O95969 90 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 CSN1S1P47710 185 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 DIRAS2Q96HU8 199 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
PRPF39-204ENST00000553605 RABL2AQ9UBK7 228 aaPredicted RBP8.74□□□□□ -1.01
PRPF39-204ENST00000553605 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
PRPF39-204ENST00000553605 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
PRPF39-204ENST00000553605 SLC25A2Q9BXI2 301 aa8.73□□□□□ -1.01
PRPF39-204ENST00000553605 C20orf85Q9H1P6 137 aa8.73□□□□□ -1.01
PRPF39-204ENST00000553605 WDR83OSQ9Y284 106 aa8.73□□□□□ -1.01
PRPF39-204ENST00000553605 A0A087WYN8 130 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 C7orf66A4D0T2 115 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 FAUP35544 74 aaKnown RBP8.72□□□□□ -1.01
PRPF39-204ENST00000553605 KCNIP4Q6PIL6 250 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 MCFD2Q8NI22 146 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 ASB13Q8WXK3 278 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 RNF185Q96GF1 192 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 SLC25A21Q9BQT8 299 aaPredicted RBP8.72□□□□□ -1.01
PRPF39-204ENST00000553605 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 Q9UF83 564 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 KIF25-AS1Q9Y6Z4 181 aa8.72□□□□□ -1.01
PRPF39-204ENST00000553605 PGPA6NDG6 321 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 HLA-DQA1P01909 254 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 CTF1Q16619 201 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 ENHOQ6UWT2 76 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 C7orf33Q8WU49 177 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 FAM167A-AS1Q96KT0 104 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 SAMD10Q9BYL1 202 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 NAA50Q9GZZ1 169 aaKnown RBP8.71□□□□□ -1.02
PRPF39-204ENST00000553605 UQCC1Q9NVA1 299 aa8.71□□□□□ -1.02
PRPF39-204ENST00000553605 RSL24D1Q9UHA3 163 aaKnown RBP8.71□□□□□ -1.02
PRPF39-204ENST00000553605 PGPEP1LA6NFU8 196 aa8.7□□□□□ -1.02
PRPF39-204ENST00000553605 FGF8P55075 233 aaPredicted RBP8.7□□□□□ -1.02
PRPF39-204ENST00000553605 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
PRPF39-204ENST00000553605 OR2T35Q8NGX2 323 aa8.7□□□□□ -1.02
PRPF39-204ENST00000553605 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
PRPF39-204ENST00000553605 C9orf170A2RU37 121 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 RANP62826 216 aaKnown RBP8.69□□□□□ -1.02
PRPF39-204ENST00000553605 BAXQ07812 192 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 IAH1Q2TAA2 248 aaPredicted RBP8.69□□□□□ -1.02
PRPF39-204ENST00000553605 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 MIR17HGQ75NE6 70 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 FXYD5Q96DB9 178 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 GSKIPQ9P0R6 139 aa8.69□□□□□ -1.02
PRPF39-204ENST00000553605 CST7O76096 145 aa8.68□□□□□ -1.02
PRPF39-204ENST00000553605 CRPP02741 224 aa8.68□□□□□ -1.02
PRPF39-204ENST00000553605 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
PRPF39-204ENST00000553605 LCE2AQ5TA79 106 aaPredicted RBP8.68□□□□□ -1.02
PRPF39-204ENST00000553605 ZFP2Q6ZN57 461 aa8.68□□□□□ -1.02
PRPF39-204ENST00000553605 PTH2Q96A98 100 aa8.68□□□□□ -1.02
PRPF39-204ENST00000553605 UBE2L5PA0A1B0GUS4 154 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 F6UZH7 168 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 L7N2F9 121 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 MBPP02686 304 aaPredicted RBP8.67□□□□□ -1.02
PRPF39-204ENST00000553605 BCAP31P51572 246 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 VAMP2P63027 116 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
PRPF39-204ENST00000553605 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 SPACA4Q8TDM5 124 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 LINC00479Q96M42 142 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 C9orf85Q96MD7 179 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 PARLQ9H300 379 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 PLAC8Q9NZF1 115 aa8.67□□□□□ -1.02
PRPF39-204ENST00000553605 TMEM262E9PQX1 116 aa8.66□□□□□ -1.02
PRPF39-204ENST00000553605 FGF7P21781 194 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms