RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 KCNS1Q96KK3 526 aa12.99□□□□□ -0.33
CPSF2-202ENST00000553427 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
CPSF2-202ENST00000553427 C8orf49Q96NF6 230 aa12.99□□□□□ -0.33
CPSF2-202ENST00000553427 TRAV34A0A0B4J273 112 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 F5H768 121 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 GCGP01275 180 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 PFN1P07737 140 aaKnown RBP12.98□□□□□ -0.33
CPSF2-202ENST00000553427 ZNF80P51504 273 aaPredicted RBP12.98□□□□□ -0.33
CPSF2-202ENST00000553427 TMEM183BQ1AE95 376 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 COX8CQ7Z4L0 72 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 TMEM183AQ8IXX5 376 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 FMC1Q96HJ9 113 aa12.98□□□□□ -0.33
CPSF2-202ENST00000553427 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 TEX46H3BTG2 121 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 P0DMU3 169 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 FAM231AP0DMU4 169 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 FAM231CP0DMU5 169 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 SPXQ9BT56 116 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 SDF2L1Q9HCN8 221 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 MANBALQ9NQG1 85 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 NAGKQ9UJ70 344 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 ZFP30Q9Y2G7 519 aa12.97□□□□□ -0.33
CPSF2-202ENST00000553427 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.33
CPSF2-202ENST00000553427 A0A1B0GV50 99 aa12.96□□□□□ -0.33
CPSF2-202ENST00000553427 TRGV2A0A075B6R0 118 aa12.95□□□□□ -0.34
CPSF2-202ENST00000553427 TYMSP04818 313 aa12.95□□□□□ -0.34
CPSF2-202ENST00000553427 S100A9P06702 114 aaKnown RBP12.95□□□□□ -0.34
CPSF2-202ENST00000553427 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
CPSF2-202ENST00000553427 H3BNG1 76 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 LTAP01374 205 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 AKR1C3P42330 323 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 UBE2G1P62253 170 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 RASL10AQ92737 203 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 TXNDC17Q9BRA2 123 aa12.94□□□□□ -0.34
CPSF2-202ENST00000553427 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
CPSF2-202ENST00000553427 HOXA5P20719 270 aa12.93□□□□□ -0.34
CPSF2-202ENST00000553427 CCL20P78556 96 aa12.93□□□□□ -0.34
CPSF2-202ENST00000553427 GNG13Q9P2W3 67 aa12.93□□□□□ -0.34
CPSF2-202ENST00000553427 SCO2A0A1W2PP80 73 aa12.92□□□□□ -0.34
CPSF2-202ENST00000553427 FABP5P3A8MUU1 101 aa12.92□□□□□ -0.34
CPSF2-202ENST00000553427 GNRH2O43555 120 aa12.92□□□□□ -0.34
CPSF2-202ENST00000553427 POM121L12Q8N7R1 296 aa12.92□□□□□ -0.34
CPSF2-202ENST00000553427 C11orf52Q96A22 123 aa12.92□□□□□ -0.34
CPSF2-202ENST00000553427 MUC4Q99102 2169 aa12.91□□□□□ -0.34
CPSF2-202ENST00000553427 M0R2P5 195 aa12.91□□□□□ -0.34
CPSF2-202ENST00000553427 RNF212Q495C1 297 aa12.91□□□□□ -0.34
CPSF2-202ENST00000553427 ZC2HC1AQ96GY0 325 aa12.91□□□□□ -0.34
CPSF2-202ENST00000553427 DNAH10Q8IVF4 4471 aa12.9□□□□□ -0.34
CPSF2-202ENST00000553427 TRAV26-1A0A087WT03 109 aa12.9□□□□□ -0.34
CPSF2-202ENST00000553427 OR5I1Q13606 314 aa12.9□□□□□ -0.34
CPSF2-202ENST00000553427 IFNA1P01562 189 aa12.89□□□□□ -0.35
CPSF2-202ENST00000553427 TAGLN2P37802 199 aaKnown RBP12.89□□□□□ -0.35
CPSF2-202ENST00000553427 CRIP1P50238 77 aa12.89□□□□□ -0.35
CPSF2-202ENST00000553427 NKX2-5P52952 324 aaPredicted RBP12.89□□□□□ -0.35
CPSF2-202ENST00000553427 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
CPSF2-202ENST00000553427 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
CPSF2-202ENST00000553427 PTH2Q96A98 100 aa12.89□□□□□ -0.35
CPSF2-202ENST00000553427 C9orf85Q96MD7 179 aa12.89□□□□□ -0.35
CPSF2-202ENST00000553427 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
CPSF2-202ENST00000553427 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
CPSF2-202ENST00000553427 SLAQ13239 276 aa12.88□□□□□ -0.35
CPSF2-202ENST00000553427 ZNF674Q2M3X9 581 aa12.88□□□□□ -0.35
CPSF2-202ENST00000553427 MLST8Q9BVC4 326 aa12.88□□□□□ -0.35
CPSF2-202ENST00000553427 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 SH2D1AO60880 128 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 NUDT3O95989 172 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 BCL2P10415 239 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 DNLZQ5SXM8 178 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 ALKAL2Q6UX46 152 aa12.87□□□□□ -0.35
CPSF2-202ENST00000553427 PDE6DO43924 150 aa12.86□□□□□ -0.35
CPSF2-202ENST00000553427 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
CPSF2-202ENST00000553427 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
CPSF2-202ENST00000553427 UBE2DNLQ8IWF7 75 aa12.86□□□□□ -0.35
CPSF2-202ENST00000553427 VSIG2Q96IQ7 327 aa12.86□□□□□ -0.35
CPSF2-202ENST00000553427 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
CPSF2-202ENST00000553427 A0A0J9YY99 117 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 B4DEV8 164 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 KRBOX1C9JBD0 128 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 IGHV3-53P01767 116 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 RPL35P42766 123 aaKnown RBP12.85□□□□□ -0.35
CPSF2-202ENST00000553427 FHL2Q14192 279 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 PIK3CD-AS1Q5SR53 167 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
CPSF2-202ENST00000553427 ORM1P02763 201 aa12.84□□□□□ -0.35
CPSF2-202ENST00000553427 ASIPP42127 132 aa12.84□□□□□ -0.35
CPSF2-202ENST00000553427 ZNF479Q96JC4 524 aa12.84□□□□□ -0.35
CPSF2-202ENST00000553427 IL36BQ9NZH7 164 aa12.84□□□□□ -0.35
CPSF2-202ENST00000553427 CIDEAO60543 219 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 CRYBA4P53673 196 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 CCL18P55774 89 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 ZNF876PQ49A33 203 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 HHLA3Q9XRX5 114 aa12.83□□□□□ -0.36
CPSF2-202ENST00000553427 DNAH2Q9P225 4427 aa12.82□□□□□ -0.36
CPSF2-202ENST00000553427 TRGV4A0A0C4DH28 118 aa12.82□□□□□ -0.36
CPSF2-202ENST00000553427 PAX4O43316 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms