RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 SPRY2O43597 315 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 LY6EQ16553 131 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 Q8N8P6 123 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 TTTY13Q9BZ97 58 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 LINC01546A6NGU7 62 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 FABP2P12104 132 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 DEFB1P60022 68 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 TM4SF20Q53R12 229 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 RAB37Q96AX2 223 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 SELENOKQ9Y6D0 94 aa9.95□□□□□ -0.82
CACNB3-219ENST00000551544 IGKV2D-26A0A0A0MRZ7 120 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 GLMPQ8WWB7 406 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 HIF1ANQ9NWT6 349 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV1-69P01742 117 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV3-11P01762 117 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 SMIM13P0DJ93 91 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 RPL11P62913 178 aaKnown RBP9.94□□□□□ -0.82
CACNB3-219ENST00000551544 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
CACNB3-219ENST00000551544 IGKV3-7A0A075B6H7 116 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 IGLV2-18A0A075B6J9 118 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 GNLYP22749 145 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 NRACQ8N912 160 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 IGKCP01834 107 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 SAMD5Q5TGI4 173 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 C9orf139Q6ZV77 190 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 GTSCR1Q86UQ5 136 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 HHLA3Q9XRX5 114 aa9.93□□□□□ -0.82
CACNB3-219ENST00000551544 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 CELSR1Q9NYQ6 3014 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 ABCA2Q9BZC7 2435 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV4-61A0A0C4DH41 118 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 M0R381 172 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 LAGE3Q14657 143 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 TMEM160Q9NX00 188 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 TMEM8BA6NDV4 472 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 LCNL1Q6ZST4 164 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 MYOZ3Q8TDC0 251 aa9.92□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV4-38-2P0DP08 117 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 GPHB5Q86YW7 130 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 OR10J6PQ8NGY7 276 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 ATP5LO75964 103 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 DPM2O94777 84 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
CACNB3-219ENST00000551544 HLA-DRB4P13762 266 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 S100A4P26447 101 aaKnown RBP9.9□□□□□ -0.82
CACNB3-219ENST00000551544 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
CACNB3-219ENST00000551544 HLA-DRB4X5D2U9 266 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 F6UB75 175 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 PF4V1P10720 104 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 GCSHP23434 173 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 SCGB2A2Q13296 93 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 ZFAND2AQ8N6M9 145 aa9.9□□□□□ -0.82
CACNB3-219ENST00000551544 IGHV4-4A0A075B6R2 117 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 H3BUX3 64 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 NDUFA4O00483 81 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 FXYD2P54710 66 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 PHLDA1Q8WV24 401 aaPredicted RBP9.89□□□□□ -0.83
CACNB3-219ENST00000551544 LINC00477Q96M19 166 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 PIMREGQ9BSJ6 248 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 VPS13CQ709C8 3753 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 SCGB1A1P11684 91 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 BLCAPP62952 87 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 SRSF1Q07955 248 aaKnown RBP eCLIP9.89□□□□□ -0.83
CACNB3-219ENST00000551544 ATP6V0BQ99437 205 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 CHAC1Q9BUX1 264 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
CACNB3-219ENST00000551544 TRAV21A0A0B4J279 112 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 RNASE4P34096 147 aaKnown RBP9.88□□□□□ -0.83
CACNB3-219ENST00000551544 CRIP2P52943 208 aaPredicted RBP9.88□□□□□ -0.83
CACNB3-219ENST00000551544 Q6ZS46 218 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 TM2D2Q9BX73 214 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 SPG11Q96JI7 2443 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 ANXA2RQ3ZCQ2 193 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 SAMD13Q5VXD3 122 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 C14orf178Q8N769 122 aaPredicted RBP9.88□□□□□ -0.83
CACNB3-219ENST00000551544 PHLDA3Q9Y5J5 127 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 LENEPQ9Y5L5 61 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 OVOL1O14753 267 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 SRD5A1P18405 259 aa9.88□□□□□ -0.83
CACNB3-219ENST00000551544 TEX48A0A1B0GUV7 120 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 SOCS3O14543 225 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 ASIPP42127 132 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 MRAP2Q96G30 205 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 CCL19Q99731 98 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 TRBV25-1A0A075B6N4 114 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 GNRH2O43555 120 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 MGPP08493 103 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 CEND1Q8N111 149 aa9.87□□□□□ -0.83
CACNB3-219ENST00000551544 RPL39LQ96EH5 51 aaKnown RBP9.87□□□□□ -0.83
CACNB3-219ENST00000551544 IGHG2P01859 326 aa9.86□□□□□ -0.83
CACNB3-219ENST00000551544 RPL24P83731 157 aaKnown RBP9.86□□□□□ -0.83
CACNB3-219ENST00000551544 USMG5Q96IX5 58 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms