RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SNCBQ16143 134 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 C6orf52Q5T4I8 152 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 PXT1Q8NFP0 134 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SLC25A40Q8TBP6 338 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 CANT1Q8WVQ1 401 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SMR3AQ99954 134 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 NIPSNAP1Q9BPW8 284 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 Q9BRP9 147 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 DERL1Q9BUN8 251 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 BPESC1Q9GZL8 116 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 CMC2Q9NRP2 79 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 ARMC1Q9NVT9 282 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 SAMHD1Q9Y3Z3 626 aaKnown RBP2.72□□□□□ -1.97
HCFC2-204ENST00000550335 CENPEQ02224 2701 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 POLQO75417 2590 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 CADP27708 2225 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 DCHS2Q6V1P9 2916 aa2.72□□□□□ -1.97
HCFC2-204ENST00000550335 TRAV7A0A075B6U4 112 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 RIIAD1A6NNX1 92 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 IQCF6A8MYZ5 107 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 CLDN25C9JDP6 229 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 GNGT2O14610 69 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 RER1O15258 196 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 HMGN1P05114 100 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 S100A5P33763 92 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 ARF6P62330 175 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 SLC38A11Q08AI6 406 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 IAH1Q2TAA2 248 aaPredicted RBP2.71□□□□□ -1.98
HCFC2-204ENST00000550335 TMEM155Q4W5P6 130 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 LINC01590Q5TEZ4 76 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 TEX47Q8TBZ9 253 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 SPTSSAQ969W0 71 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 TOMM6Q96B49 74 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 TXNDC17Q9BRA2 123 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 OR2J1Q9GZK6 312 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 LHFPL6Q9Y693 200 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 HIVEP1P15822 2718 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 AKAP6Q13023 2319 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 LRBAP50851 2863 aa2.71□□□□□ -1.98
HCFC2-204ENST00000550335 USF3Q68DE3 2245 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 ROS1P08922 2347 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 ARFGEF3Q5TH69 2177 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 ALPK2Q86TB3 2170 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 A0A0G2JQZ4 141 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 IRGMA1A4Y4 181 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 H3BRN7 92 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 H7C1C5 153 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 M0R135 149 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 NDUFA2O43678 99 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 SPI1P17947 270 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 SRP9P49458 86 aaKnown RBP2.7□□□□□ -1.98
HCFC2-204ENST00000550335 LCN6P62502 163 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 CCL8P80075 99 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 CLVS1Q8IUQ0 354 aaPredicted RBP2.7□□□□□ -1.98
HCFC2-204ENST00000550335 OR8D4Q8NGM9 314 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 OTOSQ8NHW6 89 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 H1FXQ92522 213 aaKnown RBP2.7□□□□□ -1.98
HCFC2-204ENST00000550335 SLAMF6Q96DU3 332 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 GINS4Q9BRT9 223 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 YIPF3Q9GZM5 350 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 HEATR1Q9H583 2144 aaKnown RBP2.7□□□□□ -1.98
HCFC2-204ENST00000550335 CYSLTR1Q9Y271 337 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 AP4S1Q9Y587 144 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 V9GYQ6 96 aa2.7□□□□□ -1.98
HCFC2-204ENST00000550335 ZNF469Q96JG9 3925 aaPredicted RBP2.7□□□□□ -1.98
HCFC2-204ENST00000550335 ITPR3Q14573 2671 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 PLCE1Q9P212 2302 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 HIVEP2P31629 2446 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 HMSDA8MTL9 139 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 G3V2T6 193 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 RPSAP08865 295 aaKnown RBP2.69□□□□□ -1.98
HCFC2-204ENST00000550335 C12orf74Q32Q52 190 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 IBA57Q5T440 356 aaKnown RBP2.69□□□□□ -1.98
HCFC2-204ENST00000550335 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 RPP25LQ8N5L8 163 aaKnown RBP2.69□□□□□ -1.98
HCFC2-204ENST00000550335 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 RERGLQ9H628 205 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 SLC39A9Q9NUM3 307 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 TMEM106BQ9NUM4 274 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 KAAG1Q9UBP8 84 aa2.69□□□□□ -1.98
HCFC2-204ENST00000550335 HRNRQ86YZ3 2850 aaPredicted RBP2.69□□□□□ -1.98
HCFC2-204ENST00000550335 IGHV3-64A0A075B6Q5 118 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 LYNX1G3V0Z9 82 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 HMGB3O15347 200 aaKnown RBP2.68□□□□□ -1.98
HCFC2-204ENST00000550335 PGLYRP1O75594 196 aaPredicted RBP2.68□□□□□ -1.98
HCFC2-204ENST00000550335 IFNA10P01566 189 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 IGLV3-1P01715 115 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 LYNX1P0DP58 116 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 G0S2P27469 103 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 ERP29P30040 261 aaKnown RBP2.68□□□□□ -1.98
HCFC2-204ENST00000550335 OR8B8Q15620 311 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 KISS1Q15726 138 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 GLYATL3Q5SZD4 288 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 C12orf73Q69YU5 71 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 OR2T2Q6IF00 324 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 OR9Q1Q8NGQ5 310 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 SLC7A6Q92536 515 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 AP3S1Q92572 193 aa2.68□□□□□ -1.98
HCFC2-204ENST00000550335 TIMM21Q9BVV7 248 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms