RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 NOTCH2Q04721 2471 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 D6R8Y8 96 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 MRPL51Q4U2R6 128 aaKnown RBP14.32□□□□□ -0.12
BRF1-215ENST00000549655 LINC01006Q8NI28 216 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 C16orf95Q9H693 158 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 RNF114Q9Y508 228 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 U3KQK5 164 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 CUBNO60494 3623 aa14.32□□□□□ -0.12
BRF1-215ENST00000549655 A0A0J9YX75 114 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 OR5AL1P0C617 328 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 LINC00614P0C842 121 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 CD28P10747 220 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 HILS1P60008 231 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 OR10AG1Q8NH19 301 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 CHCHD1Q96BP2 118 aaKnown RBP14.31□□□□□ -0.12
BRF1-215ENST00000549655 HIVEP2P31629 2446 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 KLLNB2CW77 178 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 M0R2Z0 102 aa14.31□□□□□ -0.12
BRF1-215ENST00000549655 A0A1W2PRX2 142 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 H3BVH4 76 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 SNAI2O43623 268 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 LY6G6DO95868 133 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 CSN3P07498 182 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 KRTDAPP60985 99 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 ANXA2RQ3ZCQ2 193 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 ORMDL3Q8N138 153 aa14.3□□□□□ -0.12
BRF1-215ENST00000549655 ANK3Q12955 4377 aaKnown RBP14.3□□□□□ -0.12
BRF1-215ENST00000549655 SORL1Q92673 2214 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 DMRTA1Q5VZB9 504 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 EBLN2Q6P2I7 272 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 RAX2Q96IS3 184 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 RNF185Q96GF1 192 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 PRELID3AQ96N28 172 aa14.29□□□□□ -0.12
BRF1-215ENST00000549655 RAB4AP20338 218 aa14.28□□□□□ -0.12
BRF1-215ENST00000549655 PMCHL1Q16048 86 aa14.28□□□□□ -0.12
BRF1-215ENST00000549655 SPANXN1Q5VSR9 72 aa14.28□□□□□ -0.12
BRF1-215ENST00000549655 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
BRF1-215ENST00000549655 TIMM8BQ9Y5J9 83 aaPredicted RBP14.28□□□□□ -0.12
BRF1-215ENST00000549655 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.12
BRF1-215ENST00000549655 IGKV3-20P01619 116 aa14.27□□□□□ -0.12
BRF1-215ENST00000549655 CKS2P33552 79 aa14.27□□□□□ -0.12
BRF1-215ENST00000549655 CACNG7P62955 275 aa14.27□□□□□ -0.12
BRF1-215ENST00000549655 CITED2Q99967 270 aaPredicted RBP14.27□□□□□ -0.12
BRF1-215ENST00000549655 S100A4P26447 101 aaKnown RBP14.27□□□□□ -0.13
BRF1-215ENST00000549655 LEPP41159 167 aa14.27□□□□□ -0.13
BRF1-215ENST00000549655 ASIPP42127 132 aa14.27□□□□□ -0.13
BRF1-215ENST00000549655 TMEM61Q8N0U2 210 aa14.27□□□□□ -0.13
BRF1-215ENST00000549655 DYNLRB2Q8TF09 96 aa14.27□□□□□ -0.13
BRF1-215ENST00000549655 IGHV1-24A0A0C4DH33 117 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 SMKR1H3BMG3 65 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 C3orf79P0CE67 100 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 PKIAP61925 76 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 FOXI2Q6ZQN5 318 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 PRSS3P2Q8NHM4 247 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 AGRNO00468 2067 aa14.26□□□□□ -0.13
BRF1-215ENST00000549655 LINC00587B1AMM8 73 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 CCL24O00175 119 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 GNRH2O43555 120 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 NCR2O95944 276 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 EVI2AP22794 236 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 FHL3Q13643 280 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 ZNF664Q8N3J9 261 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 PRO1933Q9H354 126 aa14.25□□□□□ -0.13
BRF1-215ENST00000549655 TSSC4Q9Y5U2 329 aaPredicted RBP14.25□□□□□ -0.13
BRF1-215ENST00000549655 DUSP14O95147 198 aaKnown RBP14.25□□□□□ -0.13
BRF1-215ENST00000549655 TRAV2A0A0B4J234 112 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 TRAV12-3A0A0B4J271 114 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 LOC389332A0A1B0GUA5 103 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 C7orf71A4D174 169 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 DEFB114Q30KQ6 69 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 SMIM15Q7Z3B0 74 aa14.24□□□□□ -0.13
BRF1-215ENST00000549655 NPYP01303 97 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 PPBPP02775 128 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 IFI27P40305 119 aaPredicted RBP14.23□□□□□ -0.13
BRF1-215ENST00000549655 FA2HQ7L5A8 372 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 Q8N976 141 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 AP5S1Q9NUS5 200 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 SIGLEC8Q9NYZ4 499 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 SETD2Q9BYW2 2564 aaPredicted RBP14.23□□□□□ -0.13
BRF1-215ENST00000549655 TSTD3H0UI37 97 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 SPRY2O43597 315 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 MED14OSP0DP75 135 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 DEFB131AP59861 70 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 FAM159AQ6UWV7 190 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 JMJD8Q96S16 334 aa14.23□□□□□ -0.13
BRF1-215ENST00000549655 OTOGQ6ZRI0 2925 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 TRAV12-2A0A075B6T6 113 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 NDUFA7O95182 113 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 TSPOP30536 169 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 CDKN1BP46527 198 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 SCRT2Q9NQ03 307 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 PHLDA3Q9Y5J5 127 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 M0R381 172 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 GAS8-AS1O95177 125 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 RNASE3P12724 160 aaKnown RBP14.22□□□□□ -0.13
BRF1-215ENST00000549655 SPINK13Q1W4C9 94 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 CD300EQ496F6 205 aaPredicted RBP14.22□□□□□ -0.13
BRF1-215ENST00000549655 TEX43Q6ZNM6 134 aa14.22□□□□□ -0.13
BRF1-215ENST00000549655 WNK1Q9H4A3 2382 aa14.21□□□□□ -0.13
BRF1-215ENST00000549655 KNCNA6PVL3 124 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms