RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 LINC00467Q9BRT7 94 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 MS4A6AQ9H2W1 248 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 A0A096LNJ9 63 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 A0A0J9YX75 114 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 LEPP41159 167 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 TCTEX1D4Q5JR98 221 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 WFDC11Q8NEX6 87 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 PTH2Q96A98 100 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 MRAP2Q96G30 205 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 ACACBO00763 2458 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3-49A0A0A0MS15 119 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 M0R2Z0 102 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 M0R381 172 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 ORM1P02763 201 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 LCNL1Q6ZST4 164 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 VPS13CQ709C8 3753 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 K7EMI3 77 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
RAB5B-206ENST00000549505 HOXD3P31249 432 aaPredicted RBP7.47□□□□□ -1.21
RAB5B-206ENST00000549505 DPF1Q92782 380 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 HSPB8Q9UJY1 196 aa7.47□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3OR16-13A0A075B7E8 117 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3-74A0A0B4J1X5 117 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 SCGB2A2Q13296 93 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 LINC01545Q5VT33 79 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 AMN1Q8IY45 258 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 TMEM70Q9BUB7 260 aa7.46□□□□□ -1.21
RAB5B-206ENST00000549505 D6R8Y8 96 aa7.46□□□□□ -1.22
RAB5B-206ENST00000549505 LINC01619G3V211 115 aa7.46□□□□□ -1.22
RAB5B-206ENST00000549505 DUSP14O95147 198 aaKnown RBP7.46□□□□□ -1.22
RAB5B-206ENST00000549505 RNASEKQ6P5S7 137 aaKnown RBP7.46□□□□□ -1.22
RAB5B-206ENST00000549505 FOXI2Q6ZQN5 318 aa7.46□□□□□ -1.22
RAB5B-206ENST00000549505 Q6ZSV7 163 aa7.46□□□□□ -1.22
RAB5B-206ENST00000549505 TRAV25A0A0B4J276 109 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 SYS1-DBNDD2H3BUS1 97 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 NDUFA7O95182 113 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 TWIST1Q15672 202 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 SPATA45Q537H7 98 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 PIK3CD-AS1Q5SR53 167 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 AMTNQ6UX39 209 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 FAM19A2Q8N3H0 131 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 KLHDC1Q8N7A1 406 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 NRACQ8N912 160 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
RAB5B-206ENST00000549505 AP5S1Q9NUS5 200 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 DNAJC9-AS1A6NH13 148 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 EDA2RQ9HAV5 297 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 ZNF462Q96JM2 2506 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 NBASA2RRP1 2371 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 OR10AG1Q8NH19 301 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 C9orf85Q96MD7 179 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 KIF25-AS1Q9Y6Z4 181 aa7.45□□□□□ -1.22
RAB5B-206ENST00000549505 CSN3P07498 182 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 RNASE3P12724 160 aaKnown RBP7.44□□□□□ -1.22
RAB5B-206ENST00000549505 EDN2P20800 178 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
RAB5B-206ENST00000549505 PEMTQ9UBM1 199 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 ASH1LQ9NR48 2969 aaKnown RBP7.44□□□□□ -1.22
RAB5B-206ENST00000549505 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 K7EP13 123 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 Q8N8P6 123 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 NAA38Q9BRA0 125 aaKnown RBP7.44□□□□□ -1.22
RAB5B-206ENST00000549505 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 COL12A1Q99715 3063 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 PDZD2O15018 2839 aa7.44□□□□□ -1.22
RAB5B-206ENST00000549505 NPYP01303 97 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 ASIPP42127 132 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 SMAGPQ0VAQ4 97 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 TMSB15BA0A087X1C1 80 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 CELSR2Q9HCU4 2923 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 C7orf71A4D174 169 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 CKS2P33552 79 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
RAB5B-206ENST00000549505 AMMECR1LQ6DCA0 310 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 OR9G4Q8NGQ1 327 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 OR1N2Q8NGR9 330 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 ESM1Q9NQ30 184 aa7.43□□□□□ -1.22
RAB5B-206ENST00000549505 UTP20O75691 2785 aaKnown RBP7.43□□□□□ -1.22
RAB5B-206ENST00000549505 CELSR1Q9NYQ6 3014 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 PPP1R17O96001 155 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 TSPOP30536 169 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 SYNJ2BPP57105 145 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 LINC00315P59091 139 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 SPAG8Q99932 426 aaPredicted RBP7.42□□□□□ -1.22
RAB5B-206ENST00000549505 GTSF1LQ9H1H1 148 aa7.42□□□□□ -1.22
RAB5B-206ENST00000549505 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms