RNA–Protein interactions for RNA: ENST00000548749.5

RBFOX1-211, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-211ENST00000548749 NKX6-2Q9C056 277 aaPredicted RBP13.89□□□□□ -0.19
RBFOX1-211ENST00000548749 SDF2L1Q9HCN8 221 aa13.89□□□□□ -0.19
RBFOX1-211ENST00000548749 FBLL1A6NHQ2 334 aaKnown RBP13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 UMAD1C9J7I0 102 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 TYMSP04818 313 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 PPT1P50897 306 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 CCL18P55774 89 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 SMUG1Q53HV7 270 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 KCNS1Q96KK3 526 aa13.88□□□□□ -0.19
RBFOX1-211ENST00000548749 IGHV3-16A0A0C4DH30 117 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 A0A1B0GV50 99 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 FAM3BP58499 235 aaPredicted RBP13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 SAPCD1Q5SSQ6 148 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 CST9LP1Q5W188 147 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 Q6ZNX1 250 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 SFT2D1Q8WV19 159 aa13.87□□□□□ -0.19
RBFOX1-211ENST00000548749 DNAH10Q8IVF4 4471 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 H3BNG1 76 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 TPT1P13693 172 aaKnown RBP13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 TCTE3Q8IZS6 198 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 HIST1H2BAQ96A08 127 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 VSIG2Q96IQ7 327 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 LINC00588Q9Y4M8 146 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
RBFOX1-211ENST00000548749 PFN1P07737 140 aaKnown RBP13.85□□□□□ -0.19
RBFOX1-211ENST00000548749 Q86TA4 180 aa13.85□□□□□ -0.19
RBFOX1-211ENST00000548749 C11orf21Q9P2W6 132 aa13.85□□□□□ -0.19
RBFOX1-211ENST00000548749 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 M0R2P5 195 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 PAX4O43316 350 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 DPPA3Q6W0C5 159 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 MBD3L1Q8WWY6 194 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 RASL10AQ92737 203 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 BIRC6Q9NR09 4857 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 FRAS1Q86XX4 4008 aa13.84□□□□□ -0.19
RBFOX1-211ENST00000548749 TRGV4A0A0C4DH28 118 aa13.83□□□□□ -0.2
RBFOX1-211ENST00000548749 PAGE4O60829 102 aa13.83□□□□□ -0.2
RBFOX1-211ENST00000548749 SFTA3P0C7M3 94 aa13.83□□□□□ -0.2
RBFOX1-211ENST00000548749 LGALSLQ3ZCW2 172 aaPredicted RBP13.83□□□□□ -0.2
RBFOX1-211ENST00000548749 ZNRF2Q8NHG8 242 aa13.83□□□□□ -0.2
RBFOX1-211ENST00000548749 H2AFB1P0C5Y9 115 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 UBE2G1P62253 170 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 FHL2Q14192 279 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 Q6ZR54 194 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 ZNF479Q96JC4 524 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 PRO0255Q9UI72 69 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 HHLA3Q9XRX5 114 aa13.82□□□□□ -0.2
RBFOX1-211ENST00000548749 A0A096LPF7 62 aa13.81□□□□□ -0.2
RBFOX1-211ENST00000548749 SLAQ13239 276 aa13.81□□□□□ -0.2
RBFOX1-211ENST00000548749 FMC1Q96HJ9 113 aa13.81□□□□□ -0.2
RBFOX1-211ENST00000548749 C9JCJ5 164 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 C1QBP02746 253 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 AKR1C3P42330 323 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 CRYBA4P53673 196 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 ESRGQ1W209 222 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 AKAP14Q86UN6 197 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 OR4C5Q8NGB2 326 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 TCEAL7Q9BRU2 100 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 ICOSQ9Y6W8 199 aa13.8□□□□□ -0.2
RBFOX1-211ENST00000548749 TRAV4A0A0B4J268 109 aa13.79□□□□□ -0.2
RBFOX1-211ENST00000548749 FABP5P3A8MUU1 101 aa13.79□□□□□ -0.2
RBFOX1-211ENST00000548749 LINC00336Q6ZUF6 198 aa13.79□□□□□ -0.2
RBFOX1-211ENST00000548749 RTL8CO15255 209 aa13.78□□□□□ -0.2
RBFOX1-211ENST00000548749 EIF5AL1Q6IS14 154 aaKnown RBP13.78□□□□□ -0.2
RBFOX1-211ENST00000548749 ZC2HC1AQ96GY0 325 aa13.78□□□□□ -0.2
RBFOX1-211ENST00000548749 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
RBFOX1-211ENST00000548749 IGKV3D-20A0A0C4DH25 116 aa13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 NBDYA0A0U1RRE5 68 aa13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 ZNF876PQ49A33 203 aa13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 C9orf85Q96MD7 179 aa13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 Q9H8V8 135 aa13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 MRPS16Q9Y3D3 137 aaKnown RBP13.77□□□□□ -0.21
RBFOX1-211ENST00000548749 SCO2A0A1W2PP80 73 aa13.76□□□□□ -0.21
RBFOX1-211ENST00000548749 ORM1P02763 201 aa13.76□□□□□ -0.21
RBFOX1-211ENST00000548749 S100A4P26447 101 aaKnown RBP13.76□□□□□ -0.21
RBFOX1-211ENST00000548749 SOHLH1Q5JUK2 328 aa13.76□□□□□ -0.21
RBFOX1-211ENST00000548749 C1orf134Q5TEV5 83 aa13.76□□□□□ -0.21
RBFOX1-211ENST00000548749 TRBV6-1A0A0K0K1D8 114 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 PRSS29PA6NIE9 313 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 B4DEV8 164 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 SH2D1AO60880 128 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 LTAP01374 205 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 RNASE3P12724 160 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 CRIP1P50238 77 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 RAB5CP51148 216 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 MRPL23Q16540 153 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 SLC51BQ86UW2 128 aa13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 PCNPQ8WW12 178 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-211ENST00000548749 M0R036 132 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 ASIPP42127 132 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 CCL20P78556 96 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 FAM162BQ5T6X4 162 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 NHLRC2Q8NBF2 726 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 UPK3BQ9BT76 320 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 GNG13Q9P2W3 67 aa13.74□□□□□ -0.21
RBFOX1-211ENST00000548749 PGPEP1LA6NFU8 196 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 GYPEP15421 78 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 SRIP30626 198 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 SULT1A2P50226 295 aa13.73□□□□□ -0.21
RBFOX1-211ENST00000548749 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms