RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 TMEM37Q8WXS4 190 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 C16orf74Q96GX8 76 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 FAM167A-AS1Q96KT0 104 aa11.41□□□□□ -0.58
SSH1-208ENST00000548522 A0A0J9YY99 117 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 PPP1R2P9O14990 202 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 RAB5AP20339 215 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 HOXA5P20719 270 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 RPL23P62829 140 aaKnown RBP11.4□□□□□ -0.58
SSH1-208ENST00000548522 OR5I1Q13606 314 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 C10orf113Q5VZT2 155 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 BTF3L4Q96K17 158 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 Q9H3A6 140 aa11.4□□□□□ -0.58
SSH1-208ENST00000548522 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.58
SSH1-208ENST00000548522 TRBV24-1A0A075B6N3 115 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 SNRPCP09234 159 aaKnown RBP11.39□□□□□ -0.59
SSH1-208ENST00000548522 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
SSH1-208ENST00000548522 RAB5BP61020 215 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 ZNF503Q96F45 646 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 HIGD1AQ9Y241 93 aa11.39□□□□□ -0.59
SSH1-208ENST00000548522 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
SSH1-208ENST00000548522 A0A087X0K7 114 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 C1orf196B1AJZ1 125 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 RPL7P18124 248 aaKnown RBP11.38□□□□□ -0.59
SSH1-208ENST00000548522 AKR1C3P42330 323 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 ELOBQ15370 118 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 PSG3Q16557 428 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 ESRGQ1W209 222 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
SSH1-208ENST00000548522 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
SSH1-208ENST00000548522 MRPS12O15235 138 aaKnown RBP11.37□□□□□ -0.59
SSH1-208ENST00000548522 OR7C2O60412 319 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 HYPMO75409 117 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 EIF3GO75821 320 aaKnown RBP eCLIP11.37□□□□□ -0.59
SSH1-208ENST00000548522 CDKN1BP46527 198 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 TTC32Q5I0X7 151 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 PATE2Q6UY27 113 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 LINC01551Q86U37 167 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 LINC00612Q8N6U2 182 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 PYGO2Q9BRQ0 406 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 TMEM14CQ9P0S9 112 aa11.37□□□□□ -0.59
SSH1-208ENST00000548522 GAGE12BA1L429 117 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 GAGE7O76087 117 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 NDUFB4O95168 129 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 GAGE12FP0CL80 117 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 GAGE12GP0CL81 117 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 GAGE12IP0CL82 117 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 UBE2G2P60604 165 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 ADIRFQ15847 76 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 ZNF674Q2M3X9 581 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 GFI1BQ5VTD9 330 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 PAXXQ9BUH6 204 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 OR51M1Q9H341 326 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 VPS13BQ7Z7G8 4022 aa11.36□□□□□ -0.59
SSH1-208ENST00000548522 H3BTX0 84 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 H7BYZ3 331 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 S100A7P31151 101 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 UBE2L3P68036 154 aaKnown RBP11.35□□□□□ -0.59
SSH1-208ENST00000548522 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 BIN3Q9NQY0 253 aa11.35□□□□□ -0.59
SSH1-208ENST00000548522 MRPS16Q9Y3D3 137 aaKnown RBP11.35□□□□□ -0.59
SSH1-208ENST00000548522 TRAV9-1A0A075B6T8 112 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 SCO2A0A1W2PP80 73 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 SLC17A3O00476 420 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 BTF3P20290 206 aaKnown RBP11.34□□□□□ -0.59
SSH1-208ENST00000548522 S100PP25815 95 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 LINC00315P59091 139 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 LINC00305Q7Z4B0 112 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 OR10J6PQ8NGY7 276 aa11.34□□□□□ -0.59
SSH1-208ENST00000548522 J3KRW8 73 aa11.33□□□□□ -0.6
SSH1-208ENST00000548522 S100A9P06702 114 aaKnown RBP11.33□□□□□ -0.6
SSH1-208ENST00000548522 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
SSH1-208ENST00000548522 OR10J4P0C629 311 aa11.33□□□□□ -0.6
SSH1-208ENST00000548522 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
SSH1-208ENST00000548522 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
SSH1-208ENST00000548522 ZNF331Q9NQX6 463 aaPredicted RBP11.33□□□□□ -0.6
SSH1-208ENST00000548522 GGTLC3B5MD39 225 aa11.32□□□□□ -0.6
SSH1-208ENST00000548522 TYMSP04818 313 aa11.32□□□□□ -0.6
SSH1-208ENST00000548522 MORN5Q5VZ52 161 aa11.32□□□□□ -0.6
SSH1-208ENST00000548522 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
SSH1-208ENST00000548522 Q6ZTI0 123 aa11.32□□□□□ -0.6
SSH1-208ENST00000548522 A0A1W2PPQ1 181 aa11.31□□□□□ -0.6
SSH1-208ENST00000548522 EPM2AB3EWF7 344 aa11.31□□□□□ -0.6
SSH1-208ENST00000548522 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
SSH1-208ENST00000548522 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
SSH1-208ENST00000548522 TRBV20OR9-2A0A075B6H5 130 aa11.3□□□□□ -0.6
SSH1-208ENST00000548522 A0A096LPF7 62 aa11.3□□□□□ -0.6
SSH1-208ENST00000548522 RPL35P42766 123 aaKnown RBP11.3□□□□□ -0.6
SSH1-208ENST00000548522 LYPD1Q8N2G4 141 aa11.3□□□□□ -0.6
SSH1-208ENST00000548522 SFRP2Q96HF1 295 aa11.3□□□□□ -0.6
SSH1-208ENST00000548522 TRAV12-3A0A0B4J271 114 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms