RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 SLAQ13239 276 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 ATRQ13535 2644 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 ODF3L2Q3SX64 289 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 PRR31Q5SQ13 230 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 FER1L6-AS1Q8NA97 138 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 SSBP4Q9BWG4 385 aaPredicted RBP10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
SMPDL3B-205ENST00000548116 H3BMM0 161 aa10.08□□□□□ -0.8
SMPDL3B-205ENST00000548116 PF4P02776 101 aa10.08□□□□□ -0.8
SMPDL3B-205ENST00000548116 LEPP41159 167 aa10.08□□□□□ -0.8
SMPDL3B-205ENST00000548116 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
SMPDL3B-205ENST00000548116 MUC21A0A0G2JKD1 596 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 MUC21A0A140T8X8 626 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 RBMY1BA6NDE4 496 aaKnown RBP10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 RBMY1EA6NEQ0 496 aaKnown RBP10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 M0R2Z0 102 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 UBE2CO00762 179 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 APCSP02743 223 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 RBMY1DP0C7P1 496 aaKnown RBP10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 RIGQ13278 110 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 GATD1Q8NB37 220 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 ZNF324O75467 553 aaPredicted RBP10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 HOXA5P20719 270 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 SPATA3Q8NHX4 192 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 CNFNQ9BYD5 112 aa10.07□□□□□ -0.8
SMPDL3B-205ENST00000548116 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 A0A1B0GW15 77 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 C7orf71A4D174 169 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 SPINK13Q1W4C9 94 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 ANXA2RQ3ZCQ2 193 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 COA6Q5JTJ3 125 aaKnown RBP10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 OR2K2Q8NGT1 345 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 ZMAT5Q9UDW3 170 aaKnown RBP10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 VWFP04275 2813 aa10.06□□□□□ -0.8
SMPDL3B-205ENST00000548116 CDKN1BP46527 198 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 AKR1D1P51857 326 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 C12orf57Q99622 126 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 TRAV12-3A0A0B4J271 114 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 TSPOP30536 169 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 SSTP61278 116 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 BORCS7Q96B45 105 aa10.05□□□□□ -0.8
SMPDL3B-205ENST00000548116 F2Z2F3 143 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 CRXO43186 299 aaPredicted RBP10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 SNAI2O43623 268 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 OR5AL1P0C617 328 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 NTF3P20783 257 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 BEAN1Q3B7T3 259 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 MSRB1Q9NZV6 116 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 TP53TG3Q9ULZ0 132 aa10.04□□□□□ -0.8
SMPDL3B-205ENST00000548116 IFITM10A6NMD0 228 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 GNRH2O43555 120 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 S100A8P05109 93 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 SRIP30626 198 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 FXYD7P58549 80 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 OR11H12B2RN74 326 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 H3BVH4 76 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 PRIMA1Q86XR5 153 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 OR10AG1Q8NH19 301 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 CLUHP3Q96NS8 147 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 MAST4O15021 2626 aa10.03□□□□□ -0.8
SMPDL3B-205ENST00000548116 LOC102724200A0A096LPH7 203 aaPredicted RBP10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 CD7P09564 240 aa10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 RBMY1A1P0DJD3 496 aaKnown RBP10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 RBMY1CP0DJD4 496 aa10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 Q0VG73 95 aa10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 RBMY1FQ15415 496 aaKnown RBP10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 TWIST1Q15672 202 aa10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 TDRG1Q3Y452 100 aa10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 ALKBH7Q9BT30 221 aaPredicted RBP10.02□□□□□ -0.81
SMPDL3B-205ENST00000548116 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 ASIPP42127 132 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 LINC00310P59036 64 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 TMEM256Q8N2U0 113 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 SCRT2Q9NQ03 307 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 TRRAPQ9Y4A5 3859 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 IGHV4-4A0A075B6R2 117 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 SPRY2O43597 315 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 NUPR1O60356 82 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 PDZD11Q5EBL8 140 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 FAM159AQ6UWV7 190 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 FBN1P35555 2871 aaKnown RBP10.01□□□□□ -0.81
SMPDL3B-205ENST00000548116 MED14OSP0DP75 135 aa10□□□□□ -0.81
SMPDL3B-205ENST00000548116 CMC4P56277 68 aaPredicted RBP10□□□□□ -0.81
SMPDL3B-205ENST00000548116 FAM104BQ5XKR9 115 aa10□□□□□ -0.81
SMPDL3B-205ENST00000548116 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
SMPDL3B-205ENST00000548116 KCNS1Q96KK3 526 aa10□□□□□ -0.81
SMPDL3B-205ENST00000548116 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
SMPDL3B-205ENST00000548116 OR10J3Q5JRS4 329 aa9.99□□□□□ -0.81
SMPDL3B-205ENST00000548116 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms