RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
HDAC7-227ENST00000548080 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
HDAC7-227ENST00000548080 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
HDAC7-227ENST00000548080 BTF3L4Q96K17 158 aa12.74□□□□□ -0.37
HDAC7-227ENST00000548080 ORM1P02763 201 aa12.73□□□□□ -0.37
HDAC7-227ENST00000548080 TCL1AP56279 114 aa12.73□□□□□ -0.37
HDAC7-227ENST00000548080 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
HDAC7-227ENST00000548080 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
HDAC7-227ENST00000548080 GFRA4Q9GZZ7 299 aa12.73□□□□□ -0.37
HDAC7-227ENST00000548080 TRAV21A0A0B4J279 112 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 FAM231BA6NCW3 169 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 RAB5AP20339 215 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 LINC01559Q495D7 138 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 Q6AWC8 147 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 NEU1Q99519 415 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 TM2D3Q9BRN9 247 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 NAT8BQ9UHF3 227 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 TMSB15BA0A087X1C1 80 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 NHLRC4P0CG21 123 aaPredicted RBP12.72□□□□□ -0.37
HDAC7-227ENST00000548080 GZMBP10144 247 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 CDKN1BP46527 198 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 C11orf21Q9P2W6 132 aa12.72□□□□□ -0.37
HDAC7-227ENST00000548080 HIGD1CA8MV81 97 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 Q6ZQT7 251 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 STHQ8IWL8 128 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 GTSF1Q8WW33 167 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 RCHY1Q96PM5 261 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 ZMAT4Q9H898 229 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 U3KQK5 164 aa12.71□□□□□ -0.38
HDAC7-227ENST00000548080 C7orf71A4D174 169 aa12.7□□□□□ -0.38
HDAC7-227ENST00000548080 M0R2Z0 102 aa12.7□□□□□ -0.38
HDAC7-227ENST00000548080 FOXA3P55318 350 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-227ENST00000548080 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
HDAC7-227ENST00000548080 NUP35Q8NFH5 326 aa12.7□□□□□ -0.38
HDAC7-227ENST00000548080 STAB2Q8WWQ8 2551 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 TYMSP04818 313 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 GFI1BQ5VTD9 330 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 ZNF575Q86XF7 245 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
HDAC7-227ENST00000548080 FXYD7P58549 80 aa12.68□□□□□ -0.38
HDAC7-227ENST00000548080 DEFB135Q30KP9 77 aa12.68□□□□□ -0.38
HDAC7-227ENST00000548080 TRPT1Q86TN4 253 aaKnown RBP12.68□□□□□ -0.38
HDAC7-227ENST00000548080 PGLYRP4Q96LB8 373 aa12.68□□□□□ -0.38
HDAC7-227ENST00000548080 TRAV12-2A0A075B6T6 113 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 GRIFINA4D1Z8 144 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 SPINK4O60575 86 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-227ENST00000548080 RPS10P46783 165 aaKnown RBP12.67□□□□□ -0.38
HDAC7-227ENST00000548080 APOC4P55056 127 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
HDAC7-227ENST00000548080 ANXA2RQ3ZCQ2 193 aa12.66□□□□□ -0.38
HDAC7-227ENST00000548080 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-227ENST00000548080 AMBPP02760 352 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 FER1L6-AS1Q8NA97 138 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 OVOL2Q9BRP0 275 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 CSTL1Q9H114 145 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 IGLC6P0CF74 106 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
HDAC7-227ENST00000548080 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 MRPL54Q6P161 138 aaKnown RBP12.65□□□□□ -0.38
HDAC7-227ENST00000548080 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
HDAC7-227ENST00000548080 KIR2DL5BA0A0G2JN68 375 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 KIR2DL5BA0A0G2JPC4 375 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 COX19Q49B96 90 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 LYZL1Q6UWQ5 148 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 ATP5L2Q7Z4Y8 100 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 KIR2DL5AQ8N109 375 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 KIR2DL5BQ8NHK3 375 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 KCNS1Q96KK3 526 aa12.64□□□□□ -0.39
HDAC7-227ENST00000548080 A0A1B0GUT8 65 aa12.63□□□□□ -0.39
HDAC7-227ENST00000548080 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-227ENST00000548080 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
HDAC7-227ENST00000548080 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
HDAC7-227ENST00000548080 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
HDAC7-227ENST00000548080 F2Z2F3 143 aa12.62□□□□□ -0.39
HDAC7-227ENST00000548080 ARMS2P0C7Q2 107 aa12.62□□□□□ -0.39
HDAC7-227ENST00000548080 CTRLP40313 264 aa12.62□□□□□ -0.39
HDAC7-227ENST00000548080 RIGQ13278 110 aa12.62□□□□□ -0.39
HDAC7-227ENST00000548080 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 UBE2CO00762 179 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 GNRH2O43555 120 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 SPRY2O43597 315 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 INSP01308 110 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 ASIPP42127 132 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 HBBP68871 147 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 TDRG1Q3Y452 100 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 DNLZQ5SXM8 178 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 WDR73Q6P4I2 378 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 C20orf144Q9BQM9 153 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 GNB1LQ9BYB4 327 aa12.61□□□□□ -0.39
HDAC7-227ENST00000548080 TMA7Q9Y2S6 64 aaKnown RBP12.61□□□□□ -0.39
HDAC7-227ENST00000548080 A0A1B0GW15 77 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 C1orf196B1AJZ1 125 aa12.6□□□□□ -0.39
HDAC7-227ENST00000548080 TRGC2P03986 189 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms